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Report for CCDS93336.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93336.1 Public Homo sapiens 3 CEP97 24 110 108 CCDS HistoryNCBI Gene:79598Re-query CCDS DB by CCDS ID:93336.1Re-query CCDS DB by GeneID:79598See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93336.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000704367.1 ENSP00000515875.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000704367.1Link to Ensembl Protein Viewer:ENSP00000515875.1Re-query CCDS DB by Nucleotide ID:ENST00000704367Re-query CCDS DB by Protein ID:ENSP00000515875
Current member NCBI NM_001410785.1 NP_001397714.1 Accepted alive Link to Nucleotide Sequence:NM_001410785.1Link to Protein Sequence:NP_001397714.1Re-query CCDS DB by Nucleotide ID:NM_001410785Re-query CCDS DB by Protein ID:NP_001397714Link to BLAST:NP_001397714.1

Chromosomal Locations for CCDS 93336.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 101724677 101724719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101726594 101726736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101727383 101727541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101731840 101731953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101732488 101732654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101755430 101755594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101757063 101757196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101757811 101758423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101762485 101762560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101764847 101765551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2319 nt):
ATGGCGGTGGCGCGCGTGGACGCGGCTTTGCCTCCCGGAGAAGGATCAGTGGTCAATTGGTCAGGACAGG
GACTACAGAAATTAGGTCCAAATTTACCCTGTGAAGCTGATATTCACACTTTGATTCTGGATAAAAATCA
GATTATTAAATTGGAAAATCTGGAGAAATGCAAACGATTAATACAGTTATCAGTAGCTAATAATCGGCTG
GTTCGGATGATGGGTGTGGCCAAGCTGACGTTGCTTCGTGTATTAAATTTGCCTCATAATAGCATTGGCT
GTGTGGAAGGGCTAAAGGAACTAGTACATCTGGAATGGCTGAATTTGGCAGGAAATAATCTTAAGACCCT
GCTTTTACATGGAAACATCATCACCTCTCTTAGAATGGCACCTGCTTACCTACCCAGAAGTCTTGCTATA
CTTTCTTTGGCAGAAAATGAAATCCGAGACTTAAATGAGATCTCTTTTTTGGCATCCTTAACTGAATTGG
AACAGTTGTCGATTATGAACAATCCTTGTGTGATGGCAACACCATCCATCCCAGGATTTGACTATCGGCC
GTACATCGTCAGCTGGTGCCTAAACCTCAGAGTCCTAGATGGATATGTGATTTCTCAGAAGGAAAGTTTG
AAAGCTGAATGGCTCTATAGTCAAGGCAAGGGGAGAGCATATCGGCCTGGCCAGCACATCCAGCTTGTCC
AATATCTGGCTACAGTCTGCCCCCTCACTTCTACACTAGGTCTTCAAACTGCAGAGGATGCCAAACTAGA
GAAGATTTTGAGCAAACAGAGGTTTCACCAGAGGCAGTTGATGAACCAAAGCCAAAATGAAGAGTTGTCT
CCTCTTGTTCCTGTTGAAACAAGGGCATCCCTTATTCCTGAGCATTCAAGCCCTGTTCAAGATTGCCAGA
TATCCCAGGAAAGTGAGTCTACTTTTATGCCAGTTGCATCAGGACTGTCTCCACTATCACCTACAGTTGA
GCTGAGGCTGCAGGGCATTAACTTGGGCCTAGAAGATGATGGTGTTGCAGATGAATCTGTGAAAGGGCTG
GAAAGCCAGGTGTTGGATAAGGAAGAGGAACAGCCTTTATGGGCTGCAAATGAGAATTCTGTTCAAATGA
TGAGAAGTGAAATCAATACAGAGGTAAATGAGAAAGCTGGACTATTACCTTGTCCTGAGCCAACAATAAT
CAGTGCTATCTTGAAGGATGATAACCACAGTCTTACATTTTTTCCTGAGTCAACTGAGCAGAAACAATCA
GACATAAAGAAACCAGAAAATACACAACCAGAAAATAAAGAAACCATATCTCAAGCAACTTCAGAGAAAC
TTCCCATGATTTTAACCCAGAGATCTGTTGCTTTGGGACAAGACAAAGTTGCCCTTCAGAAATTAAATGA
TGCAGCCACCAAGCTTCAGGCCTGTTGGCGGGGATTTTATGCCAGGAACTACAACCCTCAAGCCAAAGAT
GTGCGTTACGAAATCCGGCTACGCAGAATGCAAGAGCACATTGTCTGCTTAACTGATGAAATAAGGAGAT
TACGAAAAGAAAGAGATGAAGAACGTATTAAAAAATTTGTACAAGAAGAAGCTTTCAGATTCCTTTGGAA
CCAGGTAAGGTCTCTACAGGTTTGGCAACAGACAGTGGACCAGCGTCTAAGTTCCTGGCATACTGATGTT
CCTCCTATATCAAGTACTCTTGTGCCATCGAAACATCCATTATTTACCCAAAGCCAGGAGTCCTCTTGTG
ATCAAAATGCTGATTGGTTTATTGCTTCTGATGTAGCTCCTCAAGAGAAATCATTACCAGAATTTCCAGA
CTCTGGTTTTCATTCCTCTCTAACAGAACAAGTTCATTCATTGCAGCATTCTTTGGATTTTGAGAAAAGT
TCCACAGAAGGCAGTGAAAGCTCCATAATGGGGAATTCCATTGACACAGTCAGATATGGCAAAGAATCAG
ATTTAGGGGATGTTAGTGAAGAACATGGTGAATGGAATAAGGAAAGCTCAAATAACGAGCAGGACAATAG
TCTGCTTGAACAGTATTTAACTTCAGTTCAACAGCTGGAAGATGCTGATGAGAGGACCAATTTTGATACA
GAGACAAGAGATAGCAAACTTCACATTGCTTGTTTCCCAGTACAGTTAGATACATTGTCTGACGGTGCTT
CTGTAGATGAGAGTCATGGCATATCTCCTCCTTTGCAAGGTGAAATTAGCCAGACACAAGAGAATTCTAA
ATTAAATGCAGAAGTTCAGGGGCAGCAGCCAGAATGTGATTCTACATTTCAGCTATTGCATGTTGGTGTT
ACTGTGTAG

Translation (772 aa):
MAVARVDAALPPGEGSVVNWSGQGLQKLGPNLPCEADIHTLILDKNQIIKLENLEKCKRLIQLSVANNRL
VRMMGVAKLTLLRVLNLPHNSIGCVEGLKELVHLEWLNLAGNNLKTLLLHGNIITSLRMAPAYLPRSLAI
LSLAENEIRDLNEISFLASLTELEQLSIMNNPCVMATPSIPGFDYRPYIVSWCLNLRVLDGYVISQKESL
KAEWLYSQGKGRAYRPGQHIQLVQYLATVCPLTSTLGLQTAEDAKLEKILSKQRFHQRQLMNQSQNEELS
PLVPVETRASLIPEHSSPVQDCQISQESESTFMPVASGLSPLSPTVELRLQGINLGLEDDGVADESVKGL
ESQVLDKEEEQPLWAANENSVQMMRSEINTEVNEKAGLLPCPEPTIISAILKDDNHSLTFFPESTEQKQS
DIKKPENTQPENKETISQATSEKLPMILTQRSVALGQDKVALQKLNDAATKLQACWRGFYARNYNPQAKD
VRYEIRLRRMQEHIVCLTDEIRRLRKERDEERIKKFVQEEAFRFLWNQVRSLQVWQQTVDQRLSSWHTDV
PPISSTLVPSKHPLFTQSQESSCDQNADWFIASDVAPQEKSLPEFPDSGFHSSLTEQVHSLQHSLDFEKS
STEGSESSIMGNSIDTVRYGKESDLGDVSEEHGEWNKESSNNEQDNSLLEQYLTSVQQLEDADERTNFDT
ETRDSKLHIACFPVQLDTLSDGASVDESHGISPPLQGEISQTQENSKLNAEVQGQQPECDSTFQLLHVGV
TV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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