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Report for CCDS92950.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92950.1 Public Homo sapiens 2 NYAP2 24 110 108 CCDS HistoryNCBI Gene:57624Re-query CCDS DB by CCDS ID:92950.1Re-query CCDS DB by GeneID:57624See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92950.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000272907.8 ENSP00000272907.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000272907.8Link to Ensembl Protein Viewer:ENSP00000272907.7Re-query CCDS DB by Nucleotide ID:ENST00000272907Re-query CCDS DB by Protein ID:ENSP00000272907
Original member Current member NCBI NM_001371273.1 NP_001358202.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001371273.1Link to Protein Sequence:NP_001358202.1Re-query CCDS DB by Nucleotide ID:NM_001371273Re-query CCDS DB by Protein ID:NP_001358202Link to BLAST:NP_001358202.1

Chromosomal Locations for CCDS 92950.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 225408881 225409101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 225513371 225513672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 225581941 225583035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 225626917 225627126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 225651432 225651535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 225698317 225698544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2160 nt):
ATGATATCCTCCAAGATGATGAGTTCTAATCCTGAGGAAGACCCTTTGGACACATTTCTCCAGTACATTG
AG
GATATGGGGATGAAGGCCTATGATGGCTTGGTTATTCAGAATGCGTCAGATATTGCTCGAGAGAATGA
T
CGCTTGAGAAATGAAACTAACCTAGCCTATTTGAAAGAGAAGAATGAAAAACGCCGAAGACAAGAAGAA
GCA
ATAAAGCGCATAGGTGGAGAAGTAGGGCGAGGCCACGAAGGAAGTTACGTGGGCAAACATTTCCGCA
TG
GGATTCATGACAATGCCTGCTCCTCAGGACAGACTTCCCCATCCTTGCTCCAGTGGCTTTTCTGTGAG
A
TCACAGTCCCTGCACTCGGTTGGGGGCACAGACGATGACAGCAGCTGTGGCTCACGGAGACAACCACCA
CCC
AAACCCAAGAGGGACCCCAGCACCAAGCTGAGCACCTCATCAGAGACAGTCAGCAGCACTGCAGCCA
GT
AAGAGCGGGAAAACCCCTGAGAGGACTGAAGCGTCAGCTAAACCAAGACCCCACAGCGATGAATATTC
C
AAGAAGATTCCTCCTCCCAAACCGAAGCGAAATCCGAACACTCAGCTGAGCACATCTTTCGATGAAACG
TAC
ATCAAAAAGCATGGGCCCCGGAGGACGTCGCTGCCGCGGGACTCCTCCTTGTCCCAGATGGGCAGCC
CC
GCGGGAGACCCCGAGGAAGAGGAGCCCGTGTACATCGAGATGGTGGGGAACATTCTCAGAGACTTCAG
G
AAGGAGGACGATGACCAGAGCGAGGCCGTCTACGAGGAAATGAAGTACCCTATCTTTGACGACTTGGGC
CAA
GACGCCAAATGTGACTTCGACCATCACAGCTGTTCTTCGCAGTGTGCTACTCCCACGGTGCCTGACT
TG
GACTTCGCCAAGGCCTCAGTGCCATGCCCCCCCAAGGGGCTGCTTTGCGACATCCCTCCGCCCTTCCC
C
AACCTGCTTTCTCACAGACCCCCGCTGCTGGTATTTCCCCCCGCCCCCGTGCATTGCTCCCCCAACTCC
GAC
GAGTCCCCGCTTACCCCTCTGGAGGTCACGAAGCTTCCCGTGCTGGAAAACGTGTCTTACATGAAAC
AG
CCAGCCGGGGCGTCGCCCTCCACGCTGCCGTCCCACGTCCCCGGCCATGCGAAACTGGAGAAAGAGCA
G
GCCGCGGCCCTGGGACCTGCCTCTGCCACCCCTGCGCTCTCCTCGTCGCCCCCACCCCCGTCTACGCTG
TAC
CGAACCCAGTCTCCCCATGGCTACCCTAAAAGTCACTCCACCTCTCCCTCCCCCGTCAGCATGGGGA
GG
TCCCTGACTCCCCTGAGCCTCAAAAGGCCTCCCCCTTACGACGCTGTGCATTCGGGCAGCCTCTCAAG
G
AGCTCTCCTTCAGTGCCTCACTCGACCCCCAGACCCGTGTCGCAAGATGGGGCCAAGATGGTCAACGCC
GCG
GTGAACACCTACGGGGCAGCCCCGGGTGGCTCCCGGTCCCGGACACCCACGAGCCCGCTGGAGGAGC
TG
ACCAGCCTCTTCTCCTCCGGCCGCAGCCTGCTGCGCAAGTCGTCCAGTGGCCGGCGCTCCAAAGAGCC
T
GCAGAGAAATCAACAGAGGAACTGAAAGTCCGAAGCCACAGCACGGAGCCATTACCAAAGTTGGACAAC
AAG
GAAAGAGGCCACCATGGGGCGTCTTCCTCCAGAGAGCCTGTCAAAGCTCAGGAATGGGATGGAACAC
CA
GGGACACCTGTGGTCACCAGTCGACTAGGAAGATGCTCTGTGAGCCCCACCTTGTTAGCGGGAAACCA
C
AGTTCAGAGCCTAAAGTAAGCTGCAAATTAGGCCGGTCTGCGTCGACGTCAGGTGTGCCTCCTCCATCA
GTC
ACTCCCCTCAGGCAAAGCAGTGACCTGCAACAGAGCCAGGTGGCATGCATGCAGTGGTTTCATGGAG
AC
CATACAATGCTTGAGATGATTGAGAAAAAGCGTTGCTTGTGCAAGGAAATAAAGGCTAGACAGAAAAC
G
GAAAAGGGCCTTTGCAAACAGGATAGCATGCCTATCTTGCCCAGCTGGAAGAAGAATGCAGGTGCCAAG
AAG
TACAGCCCTCCACCGTATTCTAAACAGCAAACGGTATTCTGGGATACTGCCATATGA


Translation (719 aa):
MISSKMMSSNPEEDPLDTFLQYIEDMGMKAYDGLVIQNASDIARENDRLRNETNLAYLKEKNEKRRRQEE
A
IK
RIGGEVGRGHEGSYVGKHFRMGFMTMPAPQDRLPHPCSSGFSVRSQSLHSVGGTDDDSSCGSRRQPP
P
KPKRDPSTKLSTSSETVSSTAASKSGKTPERTE
ASAKPRPHSDEYSKKIPPPKPKRNPNTQLSTSFDET
Y
IKKHGPRRTSLPRDSSLSQMGSPAGDPEEEEPVYIEMVGNILRDFRKEDDDQSEAVYEEMKYPIFDDLG
Q
DAKCDFDHHSCSSQCATPTVPDLDFAKASVPCPPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVHCSPNS
D
ESPLTPLEVTKLPVLENVSYMKQPAGASPSTLPSHVPGHAKLEKEQAAALGPASATPALSSSPPPPSTL
Y
RTQSPHGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTPRPVSQDGAKMVNA
A
VNTYGAAPGGSRSRTPTSPLEELTSLFSSGRSLLRKSSSGRRSKEPAE
KSTEELKVRSHSTEPLPKLDN
K
ERGHHGASSSREPVKAQEWDGTPGTPVVTSRLGRCSVSPTLLAGNHSS
EPKVSCKLGRSASTSGVPPPS
V
TPLRQSSDLQQSQ
VACMQWFHGDHTMLEMIEKKRCLCKEIKARQKTEKGLCKQDSMPILPSWKKNAGAK
K
YSPPPYSKQQTVFWDTAI




Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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