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Report for CCDS92841.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92841.1 Public Homo sapiens 2 ACOXL 24 110 108 CCDS HistoryNCBI Gene:55289Re-query CCDS DB by CCDS ID:92841.1Re-query CCDS DB by GeneID:55289See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92841.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000340561.8 ENSP00000343717.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000340561.8Link to Ensembl Protein Viewer:ENSP00000343717.4Re-query CCDS DB by Nucleotide ID:ENST00000340561Re-query CCDS DB by Protein ID:ENSP00000343717
Original member Current member NCBI NM_001365487.2 NP_001352416.1 Accepted alive Link to Nucleotide Sequence:NM_001365487.2Link to Protein Sequence:NP_001352416.1Re-query CCDS DB by Nucleotide ID:NM_001365487Re-query CCDS DB by Protein ID:NP_001352416Link to BLAST:NP_001352416.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001352416.1 279 Q9NUZ1-3 279 100% 0 0

Chromosomal Locations for CCDS 92841.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 110768390 110768464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110784732 110784815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110793650 110793736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110794076 110794174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110798610 110798724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110799014 110799100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110801652 110801724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110805263 110805395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110841371 110841405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110886781 110886832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (840 nt):
ATGAGAGCTTTGACAGTTCAGAGAGTGAAGTTTGCCATGGACCTGCCTCTGTTAAAACGTGCAGGTCAGG
ATCTGGCAGAGAAAACAAAGAATTTTGTCAGCCGAAGCCTTGTCATAGGAGAAGTCCTCTCCATGGCGGA
CATGGCCACAGGAGTGAAGTGCGGAATAATTTATTGGCTATTTGGTGGTGCTATCAGGAATCTCGGAAGC
CCTGAACATGTTACTAAGTGGTTTCAGCCACTCCAGGAGCAGAAATACACTGGGATGTTTGCAATGACCG
AGAGGGGCCATGGGAGCAACGCGAGAGGGATCCAGACCGAAGCCACCTTTGACCTCTCTGCCCAGGAGTT
TGTAATTGACACGCCGTGTGAAAATGCGGAGAAGATGTATATTGGAAATGCCATGTACGGGAATTATGCA
GCTGTCTTTGCCCAGCTCATCATAGATGGAAGATCTCAAGGGCCCCACTGTTTCATCGTTCCTGTCCGGG
ATGAAAACGGAAGCTTGTACCCAGGAGTCACAGCTATTGATATGATGTACAAGGAGGGTCTGCATGGTGT
GGACAATGGGATATTAATATTTGACAAGGTTCGGATACCCAGGGAGAACCTGCTGGATAAGTTTGGTTCC
GTGGCTCCAGATGGACAGTACCATTCGCCTATTAGGAACAAGAGTGCAAGATTCAATGCCATGCTGGCAG
CACTGACCCCTTCGAGATTAGCTGTGGCTTTCCAAGCTATGGGTGCCATGAAGCTTGGGTTGACGATAGC
CATTCGCTATAGCCACAGGTCCAGAATCATCTCCCAGAACTGCTGTTCAGCTCCAGCTGGTCTTTATTGA

Translation (279 aa):
MRALTVQRVKFAMDLPLLKRAGQDLAEKTKNFVSRSLVIGEVLSMADMATGVKCGIIYWLFGGAIRNLGS
PEHVTKWFQPLQEQKYTGMFAMTERGHGSNARGIQTEATFDLSAQEFVIDTPCENAEKMYIGNAMYGNYA
AVFAQLIIDGRSQGPHCFIVPVRDENGSLYPGVTAIDMMYKEGLHGVDNGILIFDKVRIPRENLLDKFGS
VAPDGQYHSPIRNKSARFNAMLAALTPSRLAVAFQAMGAMKLGLTIAIRYSHRSRIISQNCCSAPAGLY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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