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Report for CCDS92828.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92828.1 Public Homo sapiens 2 SULT1C3 24 110 108 CCDS HistoryNCBI Gene:442038Re-query CCDS DB by CCDS ID:92828.1Re-query CCDS DB by GeneID:442038See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92828.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000681802.2 ENSP00000505748.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000681802.2Link to Ensembl Protein Viewer:ENSP00000505748.1Re-query CCDS DB by Nucleotide ID:ENST00000681802Re-query CCDS DB by Protein ID:ENSP00000505748
Original member Current member NCBI NM_001320878.2 NP_001307807.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001320878.2Link to Protein Sequence:NP_001307807.1Re-query CCDS DB by Nucleotide ID:NM_001320878Re-query CCDS DB by Protein ID:NP_001307807Link to BLAST:NP_001307807.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001307807.1 304 Q6IMI6-2 304 100% 0 0

Chromosomal Locations for CCDS 92828.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 108247195 108247366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 108252365 108252493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 108253345 108253442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 108255572 108255698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 108258734 108258828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 108258966 108259146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 108260568 108260680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (915 nt):
ATGGCGAAGATTGAGAAAAACGCTCCCACGATGGAAAAAAAGCCAGAACTGTTTAACATCATGGAAGTAG
AT
GGAGTCCCTACGTTGATATTATCAAAAGAATGGTGGGAAAAAGTATGTAATTTCCAAGCCAAGCCTGA
T
GATCTTATTCTGGCAACTTACCCAAAGTCAGGTACAACATGGATGCATGAAATTTTAGACATGATTCTA
AAT
GATGGTGATGTGGAGAAATGCAAAAGAGCCCAGACTCTAGATAGACACGCTTTCCTTGAACTGAAAT
TT
CCCCATAAAGAAAAACCAGATTTGGAGTTCGTTCTTGAAATGTCCTCACCACAACTGATAAAAACACA
T
CTCCCTTCACATCTGATTCCACCATCTATCTGGAAAGAAAACTGCAAGATTGTCTATGTGGCCAGAAAT
CCC
AAGGATTGCCTGGTGTCCTACTACCACTTTCACAGGATGGCTTCCTTTATGCCTGATCCTCAGAACT
TA
GAGGAATTTTATGAGAAATTCATGTCCGGAAAAGTTGTTGGCGGGTCCTGGTTTGACCATGTGAAAGG
A
TGGTGGGCTGCAAAAGACATGCACCGGATCCTCTACCTCTTCTACGAGGATATTAAAAAAAATCCAAAA
CAT
GAGATCCACAAGGTGTTGGAATTCTTGGAGAAAACTTGGTCAGGTGATGTTATAAACAAGATTGTCC
AC
CATACCTCATTTGATGTAATGAAGGATAATCCCATGGCCAACCATACTGCGGTACCTGCTCACATATT
C
AATCACTCCATCTCAAAATTTATGAGGAAAGGGATGCCTGGAGACTGGAAGAACCACTTTACTGTGGCT
TTG
AATGAGAACTTTGATAAGCATTATGAAAAGAAGATGGCAGGGTCCACACTGAACTTCTGCCTGGAGA
TC
TGA


Translation (304 aa):
MAKIEKNAPTMEKKPELFNIMEVDGVPTLILSKEWWEKVCNFQAKPDDLILATYPKSGTTWMHEILDMIL
N
DGDVEKCKRAQTLDRHAFLELKFPHKEKP
DLEFVLEMSSPQLIKTHLPSHLIPPSIWKENCKIVYVARN
P
KDCLVSYYHFHRMASFMPDPQNLEEFYEKFMSGK
VVGGSWFDHVKGWWAAKDMHRILYLFYEDIKKNPK
H
EIHKVLEFLEKTWSGDVINKIVHHTSFDVMKDNPMANHTAVPAHIFNHSISKFMRK
GMPGDWKNHFTVA
L
NENFDKHYEKKMAGSTLNFCLEI




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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