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Report for CCDS92338.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92338.1 Public Homo sapiens 17 ACBD4 24 110 108 CCDS HistoryNCBI Gene:79777Re-query CCDS DB by CCDS ID:92338.1Re-query CCDS DB by GeneID:79777See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92338.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000592162.5 ENSP00000466305.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000592162.5Link to Ensembl Protein Viewer:ENSP00000466305.1Re-query CCDS DB by Nucleotide ID:ENST00000592162Re-query CCDS DB by Protein ID:ENSP00000466305
Current member NCBI NM_001411125.1 NP_001398054.1 Accepted alive Link to Nucleotide Sequence:NM_001411125.1Link to Protein Sequence:NP_001398054.1Re-query CCDS DB by Nucleotide ID:NM_001411125Re-query CCDS DB by Protein ID:NP_001398054Link to BLAST:NP_001398054.1

Chromosomal Locations for CCDS 92338.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 45136145 45136232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45136500 45136620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45136692 45136776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45137019 45137139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45137368 45137454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45137760 45137830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45137913 45137988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45143443 45143603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (810 nt):
ATGGGCACCGAGAAAGAAAGCCCAGAGCCCGACTGCCAGAAACAGTTCCAGGCTGCAGTGAGCGTCATCC
AGAACCTGCCCAAGAACGGTTCTTACCGCCCCTCCTATGAAGAGATGCTGCGATTCTACAGTTACTACAA
GCAGGCCACCATGGGGCCCTGCCTGGTCCCCCGGCCCGGGTTCTGGGACCCCATTGGACGATATAAGTGG
GACGCCTGGAACAGTCTGGGCAAGATGAGCAGGGAGGAGGCCATGTCTGCCTACATCACTGAAATGAAAC
TGGTGGCACAGAAGGTGATCGACACAGTGCCCCTGGGTGAGGTGGCAGAGGACATGTTTGGTTACTTCGA
GCCCCTGTACCAGGTGATCCCTGACATGCCGAGGCCCCCAGAGACCTTCCTGAGAAGGGTCACAGGTTGG
AAAGAGCAGGTTGTGAATGGAGATGTTGGGGCTGTTTCAGAGCCTCCCTGCCTCCCCAAGGAACCGGCAC
CCCCAAGCCCAGAGTCCCATTCACCCAGGGACCTGGACTCCGAGGTTTTCTGTGATTCCCTGGAGCAGCT
GGAGCCTGAGCTGGTTTGGACAGAGCAGCGGGCAGCATCTGGAGGAAAGCGTGATCCCAGGAACAGCCCC
GTGCCCCCCACAAAGAAAGAGGCCGCAGCCCAGGCCCAGTGCTCGGCCATGGCCCCTTGGGCTCCCGGGG
CCCGCGCTGCTCTTCTTCCTCCTGTGGCCCTTCGTCGTCCAGTGGCTCTTCCGAATGTTTCGGACCCAAA
AGAGGTGACTGTCAGTGGAGGGGTCTCTGCAGCCAACTGA

Translation (269 aa):
MGTEKESPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKW
DAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLYQVIPDMPRPPETFLRRVTGW
KEQVVNGDVGAVSEPPCLPKEPAPPSPESHSPRDLDSEVFCDSLEQLEPELVWTEQRAASGGKRDPRNSP
VPPTKKEAAAQAQCSAMAPWAPGARAALLPPVALRRPVALPNVSDPKEVTVSGGVSAAN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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