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Report for CCDS92049.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92049.1 Public Homo sapiens 15 SAXO2 24 110 108 CCDS HistoryNCBI Gene:283726Re-query CCDS DB by CCDS ID:92049.1Re-query CCDS DB by GeneID:283726See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92049.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000682753.1 ENSP00000508095.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000682753.1Link to Ensembl Protein Viewer:ENSP00000508095.1Re-query CCDS DB by Nucleotide ID:ENST00000682753Re-query CCDS DB by Protein ID:ENSP00000508095
Original member Current member NCBI NM_001348699.2 NP_001335628.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001348699.2Link to Protein Sequence:NP_001335628.1Re-query CCDS DB by Nucleotide ID:NM_001348699Re-query CCDS DB by Protein ID:NP_001335628Link to BLAST:NP_001335628.1

Chromosomal Locations for CCDS 92049.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 82262880 82262932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82265569 82265748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82271603 82271802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82282119 82283062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1377 nt):
ATGGGAGCCAAGAGTATGAGGAGCTGGTGTCTGTGTCAGATTTGTAGCTGCGGGCGACATCATTGTCCAC
GTGGAACCACAAGGATTTATGAAAATTCTGGGGTGTTTTGCCCTACAACTGAATATTTGGAAAAATATCC
TATGTATGACAATGTTCTTCCACCTCAGAGTCTTAAAGCCAAGCAAGAAATTCGAGCATGCCATGGTAAA
ATGGAAGGAATAACTACATTTAAGTCGGATTATTGTCCTTATGAAATAGTTAAACAGCCTCGCCATGTGC
CAGAAGAATATAAACCAAAACAAGGGAAGATTGATCTTGGTACTACCTACAAACGGGATTTGAATTCGTA
TAAAGTGCAGCCTGTGGCAATAGTCCGGCCTTTGGAGAGACAAGTTAAAAAAGGAAAATTGGACACTGTC
CCAACCTATAAAGACGATTATAGAGCTTGGGACCTTCATAAAAGTGAACTTTATAAGCCAGAACAAACTT
ACCACCCGCCTACTGTGAAATTTGGAAATTCAACTACATTTCAGGATGATTTTGTTCCTCAGGAGATAAA
GCCTAGGCAAAGCTTTAAACCCTCCTCTGTGGTCAAACGTTCTACAGCCCCTTTTAATGGTATTACAAGT
CATCGCCTTGATTATATACCTCATCAGCTTGAACTCAAGTTTGAAAGGCCAAAAGAAGTTTACAAACCAA
CTGACCAACGCTTTGAGGATCTCACAACTCACCGGTGTGACTTTCAGGGTCTCATTGGTGAAACTGCAAA
ACTCTGCAGACCTGTACACACCAGAGTGACCCAGAATGCTCTGTTTGAAGGAAGCACTGAATTCCGTGAA
AGTTTTCAACCATGGGAAATCCCACCACCTGAGGTCAAGAAAGTACCAGAGTATGTGCCTCCTACAGGTA
GCATGCTGTTAAACAGCACAAGCCATCTTGACTATGTTCCATATCAGGCCAACCATGTTGTTCCCATCAG
GCCAGTTTCTCAAAAAAGAAGTAACAATTTTCCTTTCCAAGGAAAAAGCATCATGAAAGAAGATTTTCCA
GCATGGGAAAGTTGTCGTCAAGGACTTATTAAGAAGCAGCAGCAGATTCCCAACCCATCTGGAAAATTTG
ATGGTTTGAGCACTTTCAGATCTCACTATGTGCCACATGAATTGATCCCAACAGAGAGTTGCAAACCTTT
AAATATTGCTTTTAAGAGTTCTGTTCCATTTGATGATGTAACCATGTACTCTGTAGAGTACACACCGAAA
AGACAGGAAATTTGCCCAGCCAGCTATCCCTCTCCTCCAGGTTATATTTTCGACAATACAAATTCCCAAG
GTCATAAATTCTTCCGCAAGATTATTCCTGCAGTGAAGGCCTTCTAA

Translation (458 aa):
MGAKSMRSWCLCQICSCGRHHCPRGTTRIYENSGVFCPTTEYLEKYPMYDNVLPPQSLKAKQEIRACHGK
MEGITTFKSDYCPYEIVKQPRHVPEEYKPKQGKIDLGTTYKRDLNSYKVQPVAIVRPLERQVKKGKLDTV
PTYKDDYRAWDLHKSELYKPEQTYHPPTVKFGNSTTFQDDFVPQEIKPRQSFKPSSVVKRSTAPFNGITS
HRLDYIPHQLELKFERPKEVYKPTDQRFEDLTTHRCDFQGLIGETAKLCRPVHTRVTQNALFEGSTEFRE
SFQPWEIPPPEVKKVPEYVPPTGSMLLNSTSHLDYVPYQANHVVPIRPVSQKRSNNFPFQGKSIMKEDFP
AWESCRQGLIKKQQQIPNPSGKFDGLSTFRSHYVPHELIPTESCKPLNIAFKSSVPFDDVTMYSVEYTPK
RQEICPASYPSPPGYIFDNTNSQGHKFFRKIIPAVKAF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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