NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS91619.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91619.1 Public Homo sapiens 11 VSIG10L2 24 110 108 CCDS HistoryNCBI Gene:338667Re-query CCDS DB by CCDS ID:91619.1Re-query CCDS DB by GeneID:338667See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91619.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000686984.1 ENSP00000509422.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000686984.1Link to Ensembl Protein Viewer:ENSP00000509422.1Re-query CCDS DB by Nucleotide ID:ENST00000686984Re-query CCDS DB by Protein ID:ENSP00000509422
Original member Current member NCBI NM_001365077.2 NP_001352006.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001365077.2Link to Protein Sequence:NP_001352006.1Re-query CCDS DB by Nucleotide ID:NM_001365077Re-query CCDS DB by Protein ID:NP_001352006Link to BLAST:NP_001352006.1

Chromosomal Locations for CCDS 91619.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 125946056 125946137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125947686 125948036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125948305 125948580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125950014 125950289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125950910 125951158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125951813 125952073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125953400 125953690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125954087 125954383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125955057 125955179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125955482 125955506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125955615 125955667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125955817 125955914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2382 nt):
ATGGTGGGTCAGAGGGCCCAGCACAGCCCAGTCAGCCTCCTGCTGCTGATACACCTCTGCCTTCTGCACC
TG
AGGGCCTCAGGCCAGCCCCACCCGACCCCCGAGGCCCCTGTAGAGGAGGTGGTGTCTGTCCAGGGAGT
G
CGAGGTGGCTCCGTGGAGCTGGCCTGTGGCTCAGGGCCTGCCCCGCTGCTGGTCCTCTGGAGCTTCACC
CCC
CTGGGCTCCCTGGTTCCCCGGCCTGTGGCCGTCACCGATGGAGCCATGTCCAAGGTGGAGGCCATCG
CC
TCGGCTCTGGGAGTCGTGAGTCTGAGGAACAGCAGCCTGGTGCTGGGGGAGCTTCACGAGGGTGCCCG
T
GGCCACTTCCTATGCCAGGTTCTGCACGTGGCTGGCGGCCAGCTCCACGCTGCCTACTCCCACCTCACG
CTG
GCTGTGCTGGTGCCGGTGTCCAAGCCTCAAGTGCGACTGAGTAACCCGTCCCCTGTGGAGGGAGCCT
CC
GTGGTGGCCACGTGTGCAGTGCGGGAGGGCACAGAGCCCGTGACCTTTGCCTGGCAGCATCGGGCACC
C
CGAGGCCTTGGAGAGGCCCTGGTGGGGGTCACTGAGCCACTATTCCAGCTGGACCCTGTCAACCGGACA
CAC
CTAGGGTGGTACATGTGCAGCGCCAGCAACTCCGTGAACAGGCTGAGCAGTGACGGGGCCTTCCTGG
AC
GTCATTTATGGTCCTGACAAGCCTGTGATCACCATGGAGCCGCTGGGACTCACTGAGGAGGGCTTCTG
G
GCCAGTGAGAGGGAAGAGGTGACCCTGAGCTGTCTGGCTGCCTCCAACCCACCTAGTCACTATGTGTGG
CTC
CGTGACCACACGCAAGTCCACACGGGGCCTACCTATGTCATCGCCAGAGCTGGCCGTGTCCACACAG
GC
CTGTACACCTGCCTGGCCCGCAACAGCTACCTGGACACCCGCACCCAGACTACTGTCCAGCTCACCAT
C
TACTATCCCCCTGAGGGACAGCCCTCCTGTGCAGTGCATCCCAGCCCTGAGGCTGTGACCCTGCTCTGT
GCC
TGGCCTGGGGGGCTTCCGCCTGCCCAACTGCAGTGGGAAGGGCCTCAGGGACCTGGCCCTACTGCCC
CC
AGCAACGTCACCTGGAGTCACGCAGCCGCCCAGCTCCCCAGTGGCAGCGTCTTCACCTGCACTGGCCA
G
CACCCAGCCCTGGCACCGCCTGCCCTCTGCACAGTCATGCTCTGGGAGCCTCTCGGGAGGCCTACCTGC
TGG
AGCACAGCCACAATGGGGGACCAGTTCATCATGCTGAGCTGCGAGTGGCCTGGCGGCGAGCCCCCTG
CC
ACGCTGGGCTGGCTTGACGAACAGCAGCAGCCCCTGGGCGGCAGCAGCTCCTCGATGGCCGTTCACCT
C
CTGCAGGCCCAAGAAGATCTGGCTGGCAGAGAGTTCACCTGCCGGGGCACTCACCTGCTCAGGACCCCT
GAC
CCCCACTGCCACCTCCAGCTGGAAGCCCCACAGCTGGACGTGGCTGAGCCCCGCGTGTCAGTGTTGG
AG
GGGGGAGAGGCCTGGCTGGAGTGCTCTCTCCGCGGGGGCACACCACCTGCCCAGCTCCTCTGGCTGGG
G
CCTCAACAACAAAAAGTGGACCCCGGCACTTCAGGATTCATGCTGCACCCTGAGGGTGCCCAGCTGCGC
CTG
GGCATCTACGATGCTGACCCGGCACACCACAGGGGCACCTACCAATGCGTGGCCCGCAACGCCGTGG
GC
AATAGCAGTCAGAGTGTGCTGCTGGAGGTCCTGAGATATCCAGCTCCTCCCAATGTCACCATCAGCCG
C
CTGACCTACGGGAGGCACCGGAGAGAGGTGCAGCTTCAATGGGCCATCTTAGGACCCGGGAACCTGACG
GGC
TTCCTGGTGCAGCGGAAGGCCAGTGCCCTGGGCCCAGGAGCTGGGGCGTGGGAGACAGCAGCTAGTG
AC
ATCGAGCCAGAGAGCCGAGGACGGCGGCTGGGGGGCTTGGACCCCGGGGTCCTTTATGCCTTCCGCAT
C
CTGGCTCTGAATCACCACACTGCAGGACATCCCTCTGAGGTGAAGATACCAGCGGACCCCCCCTTCAGC
GCC
TACCCAGCGGTGTTGGGTGCAGCAGGCACGGGAATGGTGGTAGCAACGGTGGCCTCTCTACTGGTGT
TC
CAGTATGCTGCCCGGCACCCAGAGACTTTCCCCCGCCTTGGTCAATTGCTTGTTCCCACGGAGCAAAG
G
CACCAACAGAGGGGTTCCAGAGAAGATGCTGAGGCACCGGCAGGCCTTGAAACACCAACCACCACCCCA
GGT
TTGGATCCTGCACAAGAAACCACGGATTCTCCAGTGAATGTCACCATCACAGTGACTGCAACACCAT
AA


Translation (793 aa):
MVGQRAQHSPVSLLLLIHLCLLHLRASGQPHPTPEAPVEEVVSVQGVRGGSVELACGSGPAPLLVLWSFT
P
LGSLVPRPVAVTDGAMSKVEAIASALGVVSLRNSSLVLGELHEGARGHFLCQVLHVAGGQLHAAYSHLT
L
AVL
VPVSKPQVRLSNPSPVEGASVVATCAVREGTEPVTFAWQHRAPRGLGEALVGVTEPLFQLDPVNRT
H
LGWYMCSASNSVNRLSSDGAFLDVI
YGPDKPVITMEPLGLTEEGFWASEREEVTLSCLAASNPPSHYVW
L
RDHTQVHTGPTYVIARAGRVHTGLYTCLARNSYLDTRTQTTVQLTIY
YPPEGQPSCAVHPSPEAVTLLC
A
WPGGLPPAQLQWEGPQGPGPTAPSNVTWSHAAAQLPSGSVFTCTGQHPALAPPALCTVML
WEPLGRPTC
W
STATMGDQFIMLSCEWPGGEPPATLGWLDEQQQPLGGSSSSMAVHLLQAQEDLAGREFTCRGTHLLRTP
D
PHCHLQL
EAPQLDVAEPRVSVLEGGEAWLECSLRGGTPPAQLLWLGPQQQKVDPGTSGFMLHPEGAQLR
L
GIYDADPAHHRGTYQCVARNAVGNSSQSVLLEVL
RYPAPPNVTISRLTYGRHRREVQLQWAILGPGNLT
G
FLVQRKASALGPGAGAWETAASDIEPESRGRRLGGLDPGVLYAFRILALNHHTAGHPSEVKIP
ADPPFS
A
YPAVLGAAGTGMVVATVASLLVFQYAARHPETFP
RLGQLLVPTEQRHQQRGSREDAEAPAGLETPTTTP
G
LDPAQETTDSPVNVTITVTATP




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

External link. Please review our privacy policy.