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Report for CCDS91535.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91535.1 Public Homo sapiens 11 XRRA1 24 110 108 CCDS HistoryNCBI Gene:143570Re-query CCDS DB by CCDS ID:91535.1Re-query CCDS DB by GeneID:143570See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91535.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000684022.1 ENSP00000507107.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000684022.1Link to Ensembl Protein Viewer:ENSP00000507107.1Re-query CCDS DB by Nucleotide ID:ENST00000684022Re-query CCDS DB by Protein ID:ENSP00000507107
Original member Current member NCBI NM_001378157.1 NP_001365086.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001378157.1Link to Protein Sequence:NP_001365086.1Re-query CCDS DB by Nucleotide ID:NM_001378157Re-query CCDS DB by Protein ID:NP_001365086Link to BLAST:NP_001365086.1

Chromosomal Locations for CCDS 91535.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 74843200 74843453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 74843854 74843959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 74844168 74844283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 74845073 74845271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 74848115 74848462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 74851088 74851203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 74851989 74852082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 74859158 74859283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 74862981 74863021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 74906239 74906456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 74907145 74907273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 74921214 74921347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 74927391 74927488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 74930300 74930372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 74933801 74933872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 74936884 74937068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 74940785 74940878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2403 nt):
ATGGCCTTCTCAGGAATCTACAAGCTGGATGATGGGAAGCCTTACCTGAACAACTGCTTCCCAGCCAGAA
ATCTGCTTCGCGTGCCGGAGGAAGGCCAAGGACACTGGTTAGTGGTTCAGAAAGGTAACCTCAAGAAGAA
GCCCAAGGGTTTGGTTGGAGCACAAGCTGAACGTCGGGAAAGCCTGAAGGCGACTTCTTTTGAGTTCAAG
GGGAAGAAAGAGTCTCGGCGGGAAAATCAGGTGGACCTTCCTGGACATATCCTGGACCAGGCTTTTCTGC
TGAAGCACCACTGTGTGAGGAAGCCATCAGATCTGTGCACCATTAATGTGAGTGGCCTGAAGTTCTCCAA
GGCCAAGGAAAATGACTTCAAGCATTTTCATTCTGTGATTTATATCAATGCCTCAGAAAACCTGCTGCCT
CTAGAGGCATTTCACACGTTTCCAGCCCTAAAGGAACTGGATCTCGCATTTAATGGCATCAAAACTATCT
ACGTGAAATATGGAGACTTTAAGTTATTAGAATTCTTGGACCTTTCCTTCAACAGCCTGACTGTGGAGGC
CATCTGTGATTTGGGGATTCTGCCACACCTCCGTGTCCTGCTCCTCACAGGCAATGGCCTTACCTCCCTG
CCGCCCAATTTGGCCGTCGCAGAACAGGAGGCATCTGTAACATCGCTGACAAGCAAGAGGTACATCCTGA
GGTTCCCAGCGCTGGAGACACTGATGCTGGATGACAACAGACTCTCCAACCCCAGTTGCTTTGCCAGCCT
GGCTGGGCTCAGGAGACTGAAGAAGTTAAGCTTGGATGAAAACAGGATTATCAGGATCCCATACCTACAG
CAAGTTCAGCTCTATGACGAGTCAGTAGACTGGAATGGAGGCAGGGGAAGTCCCCATAAAGAGCCCCAAT
TCATGCTGCAGTCCAAGCCAAGGATGCTTGAGGACTCAGATGAGCAACTGGATTATACTGTACTGCCCAT
GAAAAAGGATGTTGACCGGACAGAGGTTGTGTTTTCATCTTACCCTGGATTTTCAACCTCAGAGACAACC
AAGATATGTTCACTTCCTCCCATATTCGAGATCCTTCCTGTGAAGTCACTGAAGGCCAGGAACCAGACGC
TGGCCCCACCCTTCCCAGAGCTGAGATACCTTAGCCTGGCCTACAACAAGATCGCAAAAGAGGATGCTGT
CCTACCAGTAGCTCTCTTCCCATCTCTCTGCGAGTTCGTCTTTCATAACAACCCTCTGGTGGCCCATACA
CGAGGGGTCCCTCCACTGCTGAAGAGCTTCCTCCAGGAGCGACTGGGAATCCACTTAATTCGAAGGAAGA
TAGTAAAGCCTAAGCATCATGTTTTGATGTCTCGGAAGGAATCATGGAAGGTGAAAAGCGAAATCCCAAA
GGTGCCGAAGCAGCCTCTGGTGCTCCATCACCCGCGCATGACGACAACCAAGTCTCCCTCAAAGGATATG
CTAGAGCCAGAGGCAGAGCTGGCTGAAGATCTGCCCACTACCAAAAGCACTTCTGTGGAGTCAGAGATGC
CCACTGAGAACCTGGAAGGCCATTCCCCGTCTTGCCGGACCTTCGTGCCACTGCCTCCCATCTGCTCCAA
CTCCACTGTGCATAGTGAAGAGACCCTGTCCCACCTGAGTGACACAACTGTCCGCCTCAGCCCAGAGCGC
CCATCAGATGAGGACTCCAAGAGCACAGAGTCCATCTTCCTGACCCAGGTGAGTGAACTGCCTTCCTCCG
TCATCCATAAGGATGATTTAGAGTTAAAGGAGAAAGACCAAAAGAAACCACCAACGGCACCCAGAGAGGT
GAAAGGGACTCGGAGGAAACTCCCAACTGCCTTCCTTCCCAGCAAGTACCACGGCTATGAAGAACTGCTG
ACAGCCAAGCCTGATCCAGCCTTCATTGAGCCAAAGGGAATCCAGAAGAATGCACAAGCCCTGCAACAAA
TGCTGAAGCACCCACTCCTGTGCCACTCCTCCAAGCCCAAGCTGGACACTCTTCAGAAACCCTATGTTCA
CAAAGAGAAACGGGCCCAGAGAATCCCGATTCCACCCCCAAAGAAGACTAGAGCCCAACTTCTGGATGAC
ATCTTCATTCGCTTGCGGGATCCCCGGAACATTACAGAGGCTCCACTAGGTGCTGTCCTGCACCAGTGGA
CAGAACGGCGGCTGGTGAACCACAAGCAGTACCTGGAGGCCAAGAGGCTGTTGAAGGAGTTCCAGGCACG
TTACCGGCAGCTGGTGAGTGGCTCTCTGCGCACAGTGTTCGGGACTACCCCGCTCCCCATGGCCTGCCCA
GCGCTGAGTGAGAGCCAGCCCAAGTTCGGCCACTTCCTCGAGTTCATGGATGAGTTCTGCCAGGAGCCCA
CAGCCAGTGACTCACAAGGCTAG

Translation (800 aa):
MAFSGIYKLDDGKPYLNNCFPARNLLRVPEEGQGHWLVVQKGNLKKKPKGLVGAQAERRESLKATSFEFK
GKKESRRENQVDLPGHILDQAFLLKHHCVRKPSDLCTINVSGLKFSKAKENDFKHFHSVIYINASENLLP
LEAFHTFPALKELDLAFNGIKTIYVKYGDFKLLEFLDLSFNSLTVEAICDLGILPHLRVLLLTGNGLTSL
PPNLAVAEQEASVTSLTSKRYILRFPALETLMLDDNRLSNPSCFASLAGLRRLKKLSLDENRIIRIPYLQ
QVQLYDESVDWNGGRGSPHKEPQFMLQSKPRMLEDSDEQLDYTVLPMKKDVDRTEVVFSSYPGFSTSETT
KICSLPPIFEILPVKSLKARNQTLAPPFPELRYLSLAYNKIAKEDAVLPVALFPSLCEFVFHNNPLVAHT
RGVPPLLKSFLQERLGIHLIRRKIVKPKHHVLMSRKESWKVKSEIPKVPKQPLVLHHPRMTTTKSPSKDM
LEPEAELAEDLPTTKSTSVESEMPTENLEGHSPSCRTFVPLPPICSNSTVHSEETLSHLSDTTVRLSPER
PSDEDSKSTESIFLTQVSELPSSVIHKDDLELKEKDQKKPPTAPREVKGTRRKLPTAFLPSKYHGYEELL
TAKPDPAFIEPKGIQKNAQALQQMLKHPLLCHSSKPKLDTLQKPYVHKEKRAQRIPIPPPKKTRAQLLDD
IFIRLRDPRNITEAPLGAVLHQWTERRLVNHKQYLEAKRLLKEFQARYRQLVSGSLRTVFGTTPLPMACP
ALSESQPKFGHFLEFMDEFCQEPTASDSQG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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