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Report for CCDS91408.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91408.1 Public Homo sapiens 11 MRPL23 24 110 108 CCDS HistoryNCBI Gene:6150Re-query CCDS DB by CCDS ID:91408.1Re-query CCDS DB by GeneID:6150See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91408.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000397297.7 ENSP00000380465.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397297.7Link to Ensembl Protein Viewer:ENSP00000380465.3Re-query CCDS DB by Nucleotide ID:ENST00000397297Re-query CCDS DB by Protein ID:ENSP00000380465
Original member Current member NCBI NM_001400179.1 NP_001387108.1 Accepted alive Link to Nucleotide Sequence:NM_001400179.1Link to Protein Sequence:NP_001387108.1Re-query CCDS DB by Nucleotide ID:NM_001400179Re-query CCDS DB by Protein ID:NP_001387108Link to BLAST:NP_001387108.1

Chromosomal Locations for CCDS 91408.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 1947363 1947379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1950899 1951021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1952127 1952209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1952782 1952855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1972559 1972758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1984438 1984516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (576 nt):
ATGGCGCGGAATGTGGTGTACCCCCTGTACCGGCTGGGTGGCCCACAACTTCGGGTGTTCCGAACCAACT
TCTTCATTCAGCTGGTGCGGCCCGGTGTGGCCCAGCCCGAGGACACCGTGCAGTTCCGGATCCCCATGGA
AATGACAAGGGTGGACCTCAGGAATTACCTCGAGGGCATCTATAACGTGCCCGTGGCTGCTGTGCGGACA
CGGGTGCAGCATGGCTCTAACAAGAGAAGAGATCACAGAAACGTGAGGATCAAGAAGCCGGACTACAAGG
TCGCCTACGTGCAGCTGCCCTCCCAGACACCCAGCAAGGAGCAAAATGGCCAGGGCAGCACCCTCTGTTT
CCGGAGCAGCTGCAGCAAGGGGTGGTCAACCTGGGGGACCAGGGACCCCAGACCCGCTTGGAGTCCTGTG
GGTGGCCGCATTCCCAGGAAGGCTGGATCCGGAGGACCGGCCAACAGGATCGCTCAGGATGGACGTCTTC
TACTCAAGAACCTCAGGCCCAGAGTCCCCAGGAGGGAGCAGCCGGCAACACGGTTTCCGCTGTGGAGACG
GGGCGTCCTGGCTTGA

Translation (191 aa):
MARNVVYPLYRLGGPQLRVFRTNFFIQLVRPGVAQPEDTVQFRIPMEMTRVDLRNYLEGIYNVPVAAVRT
RVQHGSNKRRDHRNVRIKKPDYKVAYVQLPSQTPSKEQNGQGSTLCFRSSCSKGWSTWGTRDPRPAWSPV
GGRIPRKAGSGGPANRIAQDGRLLLKNLRPRVPRREQPATRFPLWRRGVLA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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