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Report for CCDS91157.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91157.1 Public Homo sapiens 1 SYT14 24 110 108 CCDS HistoryNCBI Gene:255928Re-query CCDS DB by CCDS ID:91157.1Re-query CCDS DB by GeneID:255928See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91157.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000699295.1 ENSP00000514275.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000699295.1Link to Ensembl Protein Viewer:ENSP00000514275.1Re-query CCDS DB by Nucleotide ID:ENST00000699295Re-query CCDS DB by Protein ID:ENSP00000514275
Original member Current member NCBI NM_001397544.1 NP_001384473.1 Accepted alive Link to Nucleotide Sequence:NM_001397544.1Link to Protein Sequence:NP_001384473.1Re-query CCDS DB by Nucleotide ID:NM_001397544Re-query CCDS DB by Protein ID:NP_001384473Link to BLAST:NP_001384473.1
Original member Current member NCBI NM_001397545.1 NP_001384474.1 Accepted alive Link to Nucleotide Sequence:NM_001397545.1Link to Protein Sequence:NP_001384474.1Re-query CCDS DB by Nucleotide ID:NM_001397545Re-query CCDS DB by Protein ID:NP_001384474Link to BLAST:NP_001384474.1

Chromosomal Locations for CCDS 91157.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 210016004 210017099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 210021039 210021254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 210094322 210094593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 210100012 210100461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 210155721 210155910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 210160729 210161042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2538 nt):
ATGGCATTTTTCAGAAATTTCCAACAGAATCTGCCTTCAGTGTCCTCTCTAGTAGACACAATCAGTAGTG
CTGTAGAGGATTTGACCACTGCTGTTGGGGAGGTCAGCTATGCTTTAACTGACTCAGTTGCTGAGCAGGT
AACAAGTATGATGAGTGGCTTTCGCCCAGAAGAGGAAAGCTCTGTAGCAGAAGAAGCTGTAGACACTTCT
AAACAAAAAAATGCCGGGTTAACAGAAGTCTCCAAAAACACTAATTGTCAGAAAACACAAGCCAATTTAG
AGCATAGAGCAAAGCAAATAAATACTTGTAAAACTTCACTAAAGCAAGATCAAGGAATACATGAAGAAAG
AGTATTTAAACATGTTAATGATAGGCAACAAACTCTATCAGAATATCAAGACACTGGTAATACTGGTGAT
TCTTCTTTGAAAGGCTACATGAATAATGGTGGGATATCAGTTATCAGACAGAATACAAGGGCTGGATCTA
TTTGTCAAGAACTTGAAAGTACTGACAGATGTAAAACAATTGGAGTAGGAATTTCCAATAATGGTAAGAA
TGATTTAAAGGAGGTAGGATATCAAGAAATGAAAGGAAATCAGAAGAATGCCAACGGAATAAACAAATTG
TATGAGCAAAAGAAATATGTTGGTACAGATAATTGTAAAAAGGAGGAATATTCTAAATCTCGACATGTAT
ATTTGGGAAGAGATCAAGAGAATATGGGGCATTTCAATAAATGTAAACATCTTCCCGATTTAGGGCATTC
AGATCATTTAAAGAAAGCTGAAAAATGTGTTAAAAGTAAAGCATCCAAAGGGAATGAGTGTTCAGGAAAT
GAATGTTCTTTAAAAGATATTTTGACAAGCAATAGGCATATGACACAGAAATCTATTATAAAAGAAGACA
TACATCCAGCACCATCAACTAATTCTAAAGATAAGTTATCTGGGAAAATTGAAGAACAAATAAATTCAAC
GAAATACTGTAAAGTGAACGAAGACATAAAACCAAAGAAAACTGAGGCCATTTCTGCCAAGAAAGGAACA
GCAAAGAGTAAAGATGAAAAATATTCTAAGATAATACCAGAAAAAGATAATTCCTACATGGACAAAGATG
AGCATGGTTCATCCTCTGAAAGTGAAGATGAAGCGCTGGGTAAATATCATGAGGCCTTATCCAGAACACA
CAATTCCAGACTACCACTGGCAGATTCTAGACAAAGGAACTATGCTTGGGAAACAAGGCAGAAATACAGT
CCTCTATCGGCAGAGTATGATGGATACAGTAGTGAAGCATCAATAGATGAAGGAAACTGCATTCAGAGAA
TGAGAAGAACACCCCCGCTGGATGAATTGCAGCCACCACCATATCAGGATGACAGTGGTTCTCCCCATCT
GTCATGTACACCCTCAGAAATTGGGGACAGTAAATGTGAATTTTCCCACTGCAGCAACAGTCCAAGATGC
TCATATAACAAGTGCCCAAGTGAAGGAAGCACAGGTCATGAAATAGAAAGTTTTCATAATAAAGGATATG
AAGAAGATGTTCCAAGTGACAGCACTGCAGTCCTGAGCCCTGAAGATATGTCAGCTCAAGGATCATCTTC
GCAGCTTCCTAAACCTTTTGATCCTGAGCCAGAAGCTAAATATGGCACACTGGATGTGACTTTTGACTAT
GACTCACAAGAACAGAAGCTTCTGGTAACAGTGACAGCTGTCACAGACATCCCAACATATAACAGGACAG
GTGGCAACTCATGGCAAGTACACCTTGTTCTTCTACCTATAAAGAAACAGAGAGCAAAAACCAGCATCCA
GAGAGGACCATGCCCTGTCTTCACAGAAACATTTAAATTTAATCATGTTGAATCTGAGATGATTGGAAAT
TATGCAGTTCGGTTTAGACTGTATGGTGTACATCGCATGAAAAAAGAAAAGATTGTGGGGGAAAAGATTT
TTTATTTAACAAAATTGAATCTTCAAGGGAAAATGTCATTGCCTGTGATATTGGAACCTTCTTACAATCA
TTCTGGCTGTGACTCCCAAATGAGCGTGTCAGAAATGTCGTGTAGTGAAAGTACATCCTCATGTCAGTCT
CTTGAACATGGCTCAGTTCCAGAAATTCTTATTGGCCTGCTTTATAATGCCACAACTGGAAGACTATCAG
CAGAAGTGATAAAAGGCAGCCACTTCAAAAATTTGGCAGCAAACAGACCACCCAATACATATGTTAAGTT
AACTCTACTGAATTCCATGGGTCAAGAGATGTCCAAATGCAAGACATCCATCCGCAGAGGGCAGCCAAAT
CCAGTATATAAGGAAACTTTTGTCTTTCAAGTGGCCCTATTTCAGCTTTCTGATGTGACACTCATACTGT
CTGTGTATAACAAACGCAGCATGAAAAGAAAAGAGATGATAGGCTGGATTTCTTTAGGTCTCAACAGCTC
TGGAGAAGAAGAACTCAATCACTGGACTGAAATGAAAGAGTCAAAAGGACAGCAAGTATGTAGATGGCAT
GCGTTGCTAGAGTCATGA

Translation (845 aa):
MAFFRNFQQNLPSVSSLVDTISSAVEDLTTAVGEVSYALTDSVAEQVTSMMSGFRPEEESSVAEEAVDTS
KQKNAGLTEVSKNTNCQKTQANLEHRAKQINTCKTSLKQDQGIHEERVFKHVNDRQQTLSEYQDTGNTGD
SSLKGYMNNGGISVIRQNTRAGSICQELESTDRCKTIGVGISNNGKNDLKEVGYQEMKGNQKNANGINKL
YEQKKYVGTDNCKKEEYSKSRHVYLGRDQENMGHFNKCKHLPDLGHSDHLKKAEKCVKSKASKGNECSGN
ECSLKDILTSNRHMTQKSIIKEDIHPAPSTNSKDKLSGKIEEQINSTKYCKVNEDIKPKKTEAISAKKGT
AKSKDEKYSKIIPEKDNSYMDKDEHGSSSESEDEALGKYHEALSRTHNSRLPLADSRQRNYAWETRQKYS
PLSAEYDGYSSEASIDEGNCIQRMRRTPPLDELQPPPYQDDSGSPHLSCTPSEIGDSKCEFSHCSNSPRC
SYNKCPSEGSTGHEIESFHNKGYEEDVPSDSTAVLSPEDMSAQGSSSQLPKPFDPEPEAKYGTLDVTFDY
DSQEQKLLVTVTAVTDIPTYNRTGGNSWQVHLVLLPIKKQRAKTSIQRGPCPVFTETFKFNHVESEMIGN
YAVRFRLYGVHRMKKEKIVGEKIFYLTKLNLQGKMSLPVILEPSYNHSGCDSQMSVSEMSCSESTSSCQS
LEHGSVPEILIGLLYNATTGRLSAEVIKGSHFKNLAANRPPNTYVKLTLLNSMGQEMSKCKTSIRRGQPN
PVYKETFVFQVALFQLSDVTLILSVYNKRSMKRKEMIGWISLGLNSSGEEELNHWTEMKESKGQQVCRWH
ALLES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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