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Report for CCDS90888.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90888.1 Public Homo sapiens 1 C1orf232 24 110 108 CCDS HistoryNCBI Gene:110806296Re-query CCDS DB by CCDS ID:90888.1Re-query CCDS DB by GeneID:110806296See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 90888.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000635463.1 ENSP00000489126.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000635463.1Link to Ensembl Protein Viewer:ENSP00000489126.1Re-query CCDS DB by Nucleotide ID:ENST00000635463Re-query CCDS DB by Protein ID:ENSP00000489126
Original member Current member NCBI NM_001364667.1 NP_001351596.1 Accepted alive Link to Nucleotide Sequence:NM_001364667.1Link to Protein Sequence:NP_001351596.1Re-query CCDS DB by Nucleotide ID:NM_001364667Re-query CCDS DB by Protein ID:NP_001351596Link to BLAST:NP_001351596.1

Chromosomal Locations for CCDS 90888.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 26165735 26165923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26166035 26166118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 26168416 26168499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (357 nt):
ATGAACCAGGCCTTCTGGAAAACCTACAAGTCCAAAGTGCTACAGACCCTGAGTGGGGAATCTGAAGAAG
AC
CTGGCAGAGGAGAGGGAGAACCCAGCATTAGTGGGGTCTGAGACAGCAGAACCGACCGAGGAGACCTT
C
AATCCCATGTCACAGCTGGCCCGCCGGGTTCAGGGGGTCGGGGTGAAAGGCTGGCTGACAATGTCATCT
CTG
TTTAACAAAGAAGATGAAGATAAGCTGCTGCCATCAGAGCCTTGCGCTGACCAGTATGTGCGTGTGT
GT
TTGTGGTGGTTCTGGAAGGGGCCTGAGGTCCCCCTTCTGCCTGGTCCTTTCCTTCTGGTTTGTTTGTC
T
TTCTAA


Translation (118 aa):
MNQAFWKTYKSKVLQTLSGESEEDLAEERENPALVGSETAEPTEETFNPMSQLARRVQGVGVKGWLTMSS
L
FNKEDEDKLLPSEPCADQYVRVCLWWFWKGPEVPLLPGPFLLVCLSF




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser