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Report for CCDS90757.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90757.1 Public Mus musculus X 4933428M09Rik 23 108 98 CCDS HistoryNCBI Gene:71248Re-query CCDS DB by CCDS ID:90757.1Re-query CCDS DB by GeneID:71248See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 90757.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000113046.1 ENSMUSP00000108669.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113046.1Link to Ensembl Protein Viewer:ENSMUSP00000108669.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000113046Re-query CCDS DB by Protein ID:ENSMUSP00000108669
Original member Current member NCBI NM_001357856.1 NP_001344785.1 Accepted alive Link to Nucleotide Sequence:NM_001357856.1Link to Protein Sequence:NP_001344785.1Re-query CCDS DB by Nucleotide ID:NM_001357856Re-query CCDS DB by Protein ID:NP_001344785Link to BLAST:NP_001344785.1

Chromosomal Locations for CCDS 90757.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 139179488 139180061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 139180818 139180822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (579 nt):
ATGTCTGCTGTTGCAGCACAGGAGCCTGGATTACCTGACCAAGAGGGAGGTGGTGGTGGGATGGGGGACG
ACCCCAGACAAATTGTCCTGCACGTGCTGCCAATTGAAGAAGCTGCTGCTGACATCGATGGAACCGCAGC
ATTTCTGGTTTCACAGGCAGTGGTGAGAGCCATCGCAGAGGAAGAGGGTGGGCAGGAGGAGTTATTGCCT
GATGTTGAGGAGATCTGGCCACCTGTGGAAGAGGTCTGGCCCGATATTGAAGATATCTGGCCTGCAATTG
AAGCGGTCTGGCCTGATGTTGAGGAAGACTGGTACATCTGGAACGATGGCCGGGAGAATGATGAAGATCA
GAGGCAAGTTGGAGACCAACAGGATTATAATAAGGAAGGAGAGGAGGAAAACGATGATGATGATGACGAC
GACGACGAAGAGGATGACGATGATTATGAGTACGAAGAGGATGACGATGATTATGAGTACGAAGAGGATG
ACGATGATTATGAGTACGAAGAGGATGAGGATGACAACGAAGGGGAAGATAATGAAGATCAGGGGGAGAT
TATCCTGCGTGCCTATTGA

Translation (192 aa):
MSAVAAQEPGLPDQEGGGGGMGDDPRQIVLHVLPIEEAAADIDGTAAFLVSQAVVRAIAEEEGGQEELLP
DVEEIWPPVEEVWPDIEDIWPAIEAVWPDVEEDWYIWNDGRENDEDQRQVGDQQDYNKEGEEENDDDDDD
DDEEDDDDYEYEEDDDDYEYEEDDDDYEYEEDEDDNEGEDNEDQGEIILRAY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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