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Report for CCDS90452.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90452.1 Public Mus musculus 8 Carmil2 23 108 98 CCDS HistoryNCBI Gene:234695Re-query CCDS DB by CCDS ID:90452.1Re-query CCDS DB by GeneID:234695See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 90452.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000213019.1 ENSMUSP00000148422.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000213019.1Link to Ensembl Protein Viewer:ENSMUSP00000148422.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000213019Re-query CCDS DB by Protein ID:ENSMUSP00000148422
Original member Current member NCBI NM_001357333.1 NP_001344262.1 Accepted alive Link to Nucleotide Sequence:NM_001357333.1Link to Protein Sequence:NP_001344262.1Re-query CCDS DB by Nucleotide ID:NM_001357333Re-query CCDS DB by Protein ID:NP_001344262Link to BLAST:NP_001344262.1

Chromosomal Locations for CCDS 90452.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 105686274 105686313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105686560 105686651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105686746 105686796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105687369 105687431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105687553 105687677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105687784 105687875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105688070 105688140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105688258 105688331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105688465 105688540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105688624 105688712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105688795 105688889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105688964 105689050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105689136 105689248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105689344 105689421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105689552 105689628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105689724 105689828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105689999 105690068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105690183 105690264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105690378 105690474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105690557 105690614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105690747 105690919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105691083 105691245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105691327 105691425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105692301 105692429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105692517 105692630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105692803 105692963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105693038 105693125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105693256 105693396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105693525 105693591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105694014 105694249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105695025 105695125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105695208 105695568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105695652 105695774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105696861 105696897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105697024 105697095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105697217 105697438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105697561 105697641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105697868 105697945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105698031 105698143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4194 nt):
ATGGCACAGACCCCAGACGACATATCCTGTGAACTGCGAGGCGAGATCACCAGGTTCCTGTGGCCCAAGG
AGGCGGAGCTGCTGTTGAAAACCTGGCTTCCCCAGGAGGGTGCCGAGCAAAGCCATATCCTGGCACTGCT
TCGATGGAGGGCATATTTGCTGCACACCTGCCTTCCCCTGAGGGTGGACTGTACATTCAGCTACCTGGAG
GTCCAGGCCATGGCACTACAGGAAACACCCCCTCGGGTCACCTTTGAGCTGGAGTCCCTGCCTGAACTGG
TCCTGGAGTTTCCCTGTGTGGCTGCCCTCGAACAGCTGGCTCAGCATGTAGCTGCTGCCATCAAAAAGGT
CTTCCCTCGCTCAACCCTTGGGAAGCTATTCCGGAAGCCCACACCCTCGTCTCTGCTGGCTCGACTGGAG
AGAAGCCATCCCTTAGAGTCCACCATACCCAGCAGTCCGTGCGGTGGCTTCTTGGAAACATACGAAGCTC
TGTGCGATTACAATGGCTTCCCATTCCGAGAGGAGATTCAGTGGGATGTGGACACTATCTACCATCGCCA
GGGCTGCCGCCACTTCTGCCTTGGAGATTTCAGCCACTTTGGCAGCCGAGACCTGGCTTTGAGTGTAGCT
GCCTTATCTTATAACCTGTGGTTCCGGCGCCTCTCCTGCGAGGACATGAAGCTGAGCCTGGAGGTCTCAG
AACAGATTCTGCACATGACGAGTCAATCTTCCTATTTGGAGGAGCTGGTGTTGGAGGCTTGTGGTCTGCG
AGGAGACTTCGTTAGGCGACTAGCCCAGGCCCTGGCAGGACATTTTAATTCTGGACTTCGGGAGCTCAGC
CTGTCTGGGAACTTGCTGGATGACAGAGGTATGGCTGCACTCAGCAGACACCTAGAGCATTGTCCAGGAG
CCTTGAGGAGACTCAGCCTAGCACAGACAGGCTTGACACCTCGAGGAATGAGAGCTCTAGGCAGGGCACT
GGCAACGAATGCCACCTTTGACTCTACCCTGACCCACCTGGATCTTTCTGGGAACCCTGGGGCACTGGGA
CCCTCACAGGATAGTGGGGGCCTGTATACTTTCCTGAGCCGTCCTAACGTCCTGGCGTATTTGAATCTTG
CAGGCACTGACGCCACGCTAGGCACGCTCTTCACGGCCTTAGCTGGTGGCTGCTGCTCCAGCCTCACCCA
TCTGGAAGCTTCAAGGAATATCTTCTCTCGCATGAAGTCCCAAGCGGCACCAGCCGCGCTGCAACGCTTC
CTTGGCGGTACCAGGATGCTACGGCACCTGGGCCTGGCGGGCTGCAAGCTGCCACCTGAAGCGCTCAGGG
CCCTTCTAGAAGGTCTTGCACTCAACACTCAGATCCATGATCTGCACCTAGACCTCAGCGCGTGTGAGCT
CCGCTCCGTGGGTGCCCAGGTGATACAAGACTTGGTTTGTGATGCGGGTGCCTTGAGTTCCTTGGATCTG
TCGGATAATGGCTTTGGCTCCGACATGGTGACACTGGTGCTTGCCATCGGGAGGAGCCGGTCTCTGAAAC
ACGTGGCCCTTGGAAGGAACTTCAACGTTCGGTGCAAGGAGACCCTGGACGATGTCCTGCATCGGATAGC
CCAGCTAATGCAGGATGACGACTGTCCTTTGCAGTCACTATCCGTGGCTGAGTCGCGGTTGAAGCAGGGT
GCCAGCATCCTGATCCGGGCTTTGGGCACCAATCCTAAACTGACAGCGCTGGATATCAGTGGCAATGCCA
TAGGGGATGCTGGGGCCAAGATGCTAGCCAAGGCTCTACGCGTCAACACCAGGCTACGGTCTGTGATCTG
GGACCGGAACAACACATCTGCTCTGGGCCTGCTGGATGTGGCGCAAGCCCTGGAACAGAACCACAGCCTC
AAGTCCATGCCGCTGCCACTGAATGACGTAACCCAGGCTCATCGCAGCCGGCCAGAACTCACAACTCGAG
CGGTCCATCAGATCCAAGCCTGTCTCTGGAGGAACAACCAAGTAGACTCTACTTCGGACCTCAAGCCCTG
CCTTCAGCCCTTAGGTCTGATTTCAGACCACTCAGAGCAGGAGGTGAACGAGCTATGCCAGTCAGTACAG
GAGCATATGGAGCTGCTGGGCTGTGGGGCTGGGCCCCAGGGTGAGGTTGCCGTGCACCAGGCTGAGGACG
CCATCCAGAATGCCAACTTCTCTCTCAGTATCCTCCCCATTCTCTATGAGGCTGGGAGATCCCCAAGCCA
CCACTGGCAGCTGCAGCAGAAGCTAGAGAGCCTCCTGGGTCAGGTGGGCGAGATCTGCCGCCAGGACATC
CAGGACTTCACTCAGACCACCCTGGATACCACAAGGAGCCTCTGCCCACAGATGTTGCAGACACCTGGCT
GGAGGAAGCAGCTAGAGGGAGTTCTGGTGGGCTCCGGGGGCCTCCCAGAGCTGCTTCCGGAACATCTGCT
GCAAGATGCCTTCTCTAGGCTGAGGGACATGCGCCTGTCAATCACTGGGACCCTAGCAGAGAGCATTGTG
GCTCAGGCTCTTGCAGGTCTTCATGCAGCCCGAGATCGACTGGTGGAGAGGCTAACTCAGCAGGCACCAG
TGACCATGGCCCCTGCTGTACCACCACTGGGTGGAAATGAGCTCAGCCCCCTTGAGACTGGGGGATTGGA
AGAGCTTTTCTTTCCCACGGAGAAGGAAGAGGAGAGAGAAAAGGATGAGAGTTCTTCATGGAAATGGCTT
GAGCCTAGTAACTGTTTTCACCTGGTCTCCTCCCTTCATGGTGCTGCTGAGGAAGCGGAACGGGACCCCG
AGCTGGCAGCTCCGGGGGAAGATGCAGAGCCGCAGGCTGGGCCGTCTGCACGCGGCTCTCCAAGCCCCGC
CGCCCCGGGGCCACCCGCCGGCCCTCTGCCTCGCATGGACCTGCCACCCGCCGGGCAACCCCTACGCCAC
CCAACCCGAGCCCGACCGAGACCACGTCGCCAGCACCACCACCGCCCGCCGCCGGGGGGCCCCCAGGTGC
CCCCAGCCCTGCTTCAAGAAGGAAATGGGCTCACTGCTCGCGTGGATGAGGGTGTGGAGGAGTTCTTCTC
CAAAAGGCTGATCCAGCAGGATCACTTCTGGGCCCCAGAGGAGGATCCAGCCACTGAGGGTGGTGCCACT
CCTGTCCCCCGCACACTTCGAAAGAAGCTGGGTACGCTCTTTGCCTTTAAGAAACCTCGTTCAACAAGGG
GTCCGCGACCTGACCTGGAGACCAGCCCTGGAGCAGCAGCTCGAGCCAGAAAATCCACACTTGGGGATCT
CCTGCGACCACCGGCCCGTCCAGGCCGTGGTGAGGAACCTGGAGGGGCGGAAGGCGGCACCAGCAGCCCT
GACCCTGCTCGCAGAAATCGGCCTCGGTACACGCGGGAAAGCAAGGCCTACTCCATGATCCTGCTACCTG
CTGAGGAGGAAGCAGCCGTGGGTACCAGACCTGATAAGAGGCGGCCTCTGGAACGGGGAGACACAGAACT
GGCTCCATCTTTTGAGCAGCGGGTACAAGTGATGCTACAGAGGATCGGCGTGAGCCGGGCCAGTGGGGGT
GCCGAGAGCAAGAGGAAGCAAAGTAAAGACGGCGAGATCAAGAAGGCAGGCTCTGATGGTGACATTATGG
ACAGTTCCACAGAGACCCCTCCCATCTCAATCAAGTCCCGTACCCACTCTGTGTCTGCTGATCCCTCATG
CAGACCTGGGCCAGGAGGCCAGGGGCCTGAGTCTGCCACCTGGAAGACATTGGGACAGCAGCTGAATGCA
GAGCTCAGAGGCCGTGGTTGGGGCCAACAGGATGGTCCAGGGCCCCCCTCCCCATGTCCCAGCCCAAGTC
CCCGAAGAACCAGCCCCGCCCCAGACATCCTGAGTCTCCCAGAGGACCCCTGCTTGGGCCCTAGGAATGA
AGATGGCCAGCTGAGGCCGAGGCCTCTTTCGGCAGGCCGGCGAGCAGTGTCTGTGCATGAGGACCAGCTC
CAGGCCCCCGCGGAACGGCCCCTCCGGCTGCAGCGCTCCCCTGTCCTCAAGCGTAGGCCGAAGCTCGAGG
CACCCCCATCCCCAAGCTTAGGCTCTGGCCTTGGATCCAAGCCTCTTCCTCCGTACCCCACAGAACCCTC
CAGCCCTGAGCGGAGCCCTCCCTCCCCAGCCACAGACCAAAGAGGCGGCGGCCCCAACCCCTGA

Translation (1397 aa):
MAQTPDDISCELRGEITRFLWPKEAELLLKTWLPQEGAEQSHILALLRWRAYLLHTCLPLRVDCTFSYLE
VQAMALQETPPRVTFELESLPELVLEFPCVAALEQLAQHVAAAIKKVFPRSTLGKLFRKPTPSSLLARLE
RSHPLESTIPSSPCGGFLETYEALCDYNGFPFREEIQWDVDTIYHRQGCRHFCLGDFSHFGSRDLALSVA
ALSYNLWFRRLSCEDMKLSLEVSEQILHMTSQSSYLEELVLEACGLRGDFVRRLAQALAGHFNSGLRELS
LSGNLLDDRGMAALSRHLEHCPGALRRLSLAQTGLTPRGMRALGRALATNATFDSTLTHLDLSGNPGALG
PSQDSGGLYTFLSRPNVLAYLNLAGTDATLGTLFTALAGGCCSSLTHLEASRNIFSRMKSQAAPAALQRF
LGGTRMLRHLGLAGCKLPPEALRALLEGLALNTQIHDLHLDLSACELRSVGAQVIQDLVCDAGALSSLDL
SDNGFGSDMVTLVLAIGRSRSLKHVALGRNFNVRCKETLDDVLHRIAQLMQDDDCPLQSLSVAESRLKQG
ASILIRALGTNPKLTALDISGNAIGDAGAKMLAKALRVNTRLRSVIWDRNNTSALGLLDVAQALEQNHSL
KSMPLPLNDVTQAHRSRPELTTRAVHQIQACLWRNNQVDSTSDLKPCLQPLGLISDHSEQEVNELCQSVQ
EHMELLGCGAGPQGEVAVHQAEDAIQNANFSLSILPILYEAGRSPSHHWQLQQKLESLLGQVGEICRQDI
QDFTQTTLDTTRSLCPQMLQTPGWRKQLEGVLVGSGGLPELLPEHLLQDAFSRLRDMRLSITGTLAESIV
AQALAGLHAARDRLVERLTQQAPVTMAPAVPPLGGNELSPLETGGLEELFFPTEKEEEREKDESSSWKWL
EPSNCFHLVSSLHGAAEEAERDPELAAPGEDAEPQAGPSARGSPSPAAPGPPAGPLPRMDLPPAGQPLRH
PTRARPRPRRQHHHRPPPGGPQVPPALLQEGNGLTARVDEGVEEFFSKRLIQQDHFWAPEEDPATEGGAT
PVPRTLRKKLGTLFAFKKPRSTRGPRPDLETSPGAAARARKSTLGDLLRPPARPGRGEEPGGAEGGTSSP
DPARRNRPRYTRESKAYSMILLPAEEEAAVGTRPDKRRPLERGDTELAPSFEQRVQVMLQRIGVSRASGG
AESKRKQSKDGEIKKAGSDGDIMDSSTETPPISIKSRTHSVSADPSCRPGPGGQGPESATWKTLGQQLNA
ELRGRGWGQQDGPGPPSPCPSPSPRRTSPAPDILSLPEDPCLGPRNEDGQLRPRPLSAGRRAVSVHEDQL
QAPAERPLRLQRSPVLKRRPKLEAPPSPSLGSGLGSKPLPPYPTEPSSPERSPPSPATDQRGGGPNP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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