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Report for CCDS90281.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90281.1 Public Mus musculus 7 Stard10 23 108 98 CCDS HistoryNCBI Gene:56018Re-query CCDS DB by CCDS ID:90281.1Re-query CCDS DB by GeneID:56018See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 90281.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000163799.8 ENSMUSP00000129408.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000163799.8Link to Ensembl Protein Viewer:ENSMUSP00000129408.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000163799Re-query CCDS DB by Protein ID:ENSMUSP00000129408
Original member Current member NCBI NM_001360460.1 NP_001347389.1 Accepted alive Link to Nucleotide Sequence:NM_001360460.1Link to Protein Sequence:NP_001347389.1Re-query CCDS DB by Nucleotide ID:NM_001360460Re-query CCDS DB by Protein ID:NP_001347389Link to BLAST:NP_001347389.1

Chromosomal Locations for CCDS 90281.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 101317225 101317227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101321250 101321352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101321714 101322033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101342498 101342645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101343184 101343287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101343917 101344034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101345635 101345687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101345892 101346137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1095 nt):
ATGGGTCCCCGCGCGGCCCCCGGTCGCCCGGGCAGCGGAGGCAGCGGCGGCGGCGGAAGAGCTCGCACAC
CGGCCCCGGCGGGCCCCGGCAGAGAAGCCCGCACAGGTCCCAGGAAGGTGGCGTCAGCATCTGCAGCCGC
GTCGACGTTGTCTGAGCCTCCGCGGAGGACCCAGGAGAGTCGGACTAGGACCAGGGCCCCGGGCCTCCCC
ACGCTCCCTATGGAAAAGCCAGCTGCCTCAACAGAACCCCAAGGGTCTCGGCCCGCCTTGGGCCGTGAAA
GTGTCCAGGTGCCCGATGACCAGGACTTCCGCAGTTTCCGGTCAGAGTGTGAGGCCGAGGTGGGCTGGAA
CCTGACCTACAGCAAGGCCGGCGTGTCTGTGTGGGTGCAGGCTGTGGAGATGGATCGAACTCTGCACAAG
ATCAAGTGTCGGATGGAATGCTGTGACGTGCCAGCTGAGACGCTCTACGATGTCCTGCATGACATAGAAT
ACAGAAAGAAGTGGGACAGTAATGTCATTGAGACTTTCGACATCGCCCGCTTGACTGTCAACGCTGACGT
AGGATATTATTCCTGGAGGTGTCCCAAGCCCCTGAAGAACCGTGATGTCATCACCCTCCGCTCCTGGCTC
CCCATGGGCGCTGATTACATCATTATGAACTACTCAGTGAAACACCCTAAATACCCACCTCGGAAAGACT
TGGTCCGAGCTGTGTCCATCCAGACGGGCTACCTCATCCAGAGCACGGGGCCCAAGAGCTGCGTCATCAC
CTACCTGGCCCAAGTGGACCCCAAAGGCTCCTTACCCAAGTGGGTGGTGAATAAGTCATCTCAGTTCCTG
GCCCCCAAGGCCATGAAGAAGATGTACAAGGCCTGCATCAAGTACCCCGAGTGGAAGCAGAAACACCAGC
CTCATTTCAAGCCATGGCTGCACCCGGAGCAGAGCCCATTGCCCAGCCTGGCGCTGTCAGAGTTGTCGGT
GCAACATGCAGACTCACTGGAGAACATCGATGAGAGTGCAGTGACAGAGAGCCGCGAGGAGCGGGCAGGC
GGTGCGGGAGGAGAGGGCAGCGACGATGACACCTCGCTCACCTGA

Translation (364 aa):
MGPRAAPGRPGSGGSGGGGRARTPAPAGPGREARTGPRKVASASAAASTLSEPPRRTQESRTRTRAPGLP
TLPMEKPAASTEPQGSRPALGRESVQVPDDQDFRSFRSECEAEVGWNLTYSKAGVSVWVQAVEMDRTLHK
IKCRMECCDVPAETLYDVLHDIEYRKKWDSNVIETFDIARLTVNADVGYYSWRCPKPLKNRDVITLRSWL
PMGADYIIMNYSVKHPKYPPRKDLVRAVSIQTGYLIQSTGPKSCVITYLAQVDPKGSLPKWVVNKSSQFL
APKAMKKMYKACIKYPEWKQKHQPHFKPWLHPEQSPLPSLALSELSVQHADSLENIDESAVTESREERAG
GAGGEGSDDDTSLT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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