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Report for CCDS90274.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90274.1 Public Mus musculus 7 Acer3 23 108 98 CCDS HistoryNCBI Gene:66190Re-query CCDS DB by CCDS ID:90274.1Re-query CCDS DB by GeneID:66190See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 90274.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000120520.7 ENSMUSP00000112884.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000120520.7Link to Ensembl Protein Viewer:ENSMUSP00000112884.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000120520Re-query CCDS DB by Protein ID:ENSMUSP00000112884
Original member Current member NCBI NM_001360615.1 NP_001347544.1 Accepted alive Link to Nucleotide Sequence:NM_001360615.1Link to Protein Sequence:NP_001347544.1Re-query CCDS DB by Nucleotide ID:NM_001360615Re-query CCDS DB by Protein ID:NP_001347544Link to BLAST:NP_001347544.1

Chromosomal Locations for CCDS 90274.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 98216837 98216890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 98218056 98218101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 98223912 98224016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 98226399 98226500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 98243949 98244007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 98251890 98251925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 98257696 98257777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 98259405 98259457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 98261587 98261639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 98266137 98266224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (678 nt):
ATGATCATACCTCCAATTTTTGGTGCAATTCAAGGCATTAGAGACAGACTGGAGAAGCGGTACATTGCTG
CTTACTTAGCACTCACAGTGGTAGGAATGGGATCCTGGTGTTTCCACATGACTCTGAAATATGAAATGCA
GCTGTTGGATGAGCTCCCCATGATTTACAGCTGCTGCATATTTGTATACTGCATGTTTGAGTGTTTCAAG
ACAAAGAGCTCAATAAACTACCATCTTCTTTTTACCCTATTTCTATACAGTTTAACAGTAACTACGATTT
ACCTAAAAGTCAAAGAACCTATATTCCATCAGGTCATGTATGGAATGTTGGTCTTTACATTAGTACTTCG
TTCTATTTATATTGTTACATGGGTTTATCCATGGCTTAGAGGACTAGGTTATACATCCTTAACTGTCTTT
TTATTGGGGTTTTTATTGTGGAATATAGATAACATCTTTTGTGATTCACTGAGGAACTTTCGAAAGAGAG
TGCCCCCCGTCCTAGGTGTTACAACACAGTTTCATGCATGGTGGCATATTCTAACTGGCCTGGGTTCTTA
TCTTCACATCCTTTTCAGTTTATATACAAGAACACTTTACCTGAGGTACAGGCCAAAAGTGAAGTTTCTC
TTTGGAATCTGGCCAGCAGTCATGTTTGAACCTCAGAGGAAGCACTGA

Translation (225 aa):
MIIPPIFGAIQGIRDRLEKRYIAAYLALTVVGMGSWCFHMTLKYEMQLLDELPMIYSCCIFVYCMFECFK
TKSSINYHLLFTLFLYSLTVTTIYLKVKEPIFHQVMYGMLVFTLVLRSIYIVTWVYPWLRGLGYTSLTVF
LLGFLLWNIDNIFCDSLRNFRKRVPPVLGVTTQFHAWWHILTGLGSYLHILFSLYTRTLYLRYRPKVKFL
FGIWPAVMFEPQRKH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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