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Report for CCDS8983.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8983.1 Public Homo sapiens 12 MDM1 24 110 108 CCDS HistoryNCBI Gene:56890Re-query CCDS DB by CCDS ID:8983.1Re-query CCDS DB by GeneID:56890See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8983.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000303145.11 ENSP00000302537.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000303145.11Link to Ensembl Protein Viewer:ENSP00000302537.7Re-query CCDS DB by Nucleotide ID:ENST00000303145Re-query CCDS DB by Protein ID:ENSP00000302537
Original member Current member NCBI NM_017440.6 NP_059136.2 Accepted alive Link to Nucleotide Sequence:NM_017440.6Link to Protein Sequence:NP_059136.2Re-query CCDS DB by Nucleotide ID:NM_017440Re-query CCDS DB by Protein ID:NP_059136Link to BLAST:NP_059136.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_059136.2 714 Q8TC05-1 714 100% 0 0

Chromosomal Locations for CCDS 8983.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 68295254 68295366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 68296923 68296982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 68302620 68302872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 68313443 68313552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 68313644 68313753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 68314948 68315265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 68316078 68316253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 68321347 68321446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 68321525 68321628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 68323073 68323240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 68325441 68325575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 68326657 68327021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 68331107 68331221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 68332228 68332245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2145 nt):
ATGCCGGTGCGCTTCAAGGGGCTGAGTGAATACCAGAGGAACTTCCTGTGGAAAAAGTCTTATTTGTCCG
AGTCTTGTAATTCCTCCGTGGGGCGAAAGTACCCATGGGCTGGACTTAGATCAGATCAATTAGGCATCAC
GAAAGAGCCAAGTTTTATTTCAAAAAGAAGAGTCCCTTACCATGACCCACAGATTTCAAAATCTCTGGAG
TGGAATGGAGCTATCTCAGAGAGCAATGTGGTTGCATCACCAGAACCAGAAGCCCCGGAAACACCAAAAT
CACAAGAAGCAGAACAAAAGGATGTTACTCAAGAAAGAGTTCACTCACTAGAAGCTTCCAGGGTTCCCAA
AAGAACCAGATCTCACTCTGCAGACTCCAGAGCTGAAGGGGCTTCAGATGTGGAAAATAATGAGGGTGTA
ACAAACCATACACCAGTTAATGAAAATGTGGAACTGGAACATTCTACCAAGGTTCTTTCAGAAAATGTAG
ATAATGGGTTGGATAGACTTCTGCGTAAGAAAGCTGGATTGACTGTTGTTCCTTCATATAATGCCTTGAG
AAATTCTGAATATCAAAGGCAGTTTGTTTGGAAGACTTCTAAAGAAACTGCTCCAGCTTTTGCAGCCAAT
CAGGTTTTCCACAATAAAAGCCAGTTTGTTCCACCATTCAAAGGTAACTCAGTCATCCATGAAACTGAAT
ACAAAAGAAATTTCAAGGGTTTATCTCCAGTGAAAGAACCAAAATTAAGAAATGATTTGAGAGAAAACAG
AAATCTTGAAACAGTGTCTCCTGAAAGGAAGAGTAATAAAATAGACGATCGTTTAAAATTGGAAGCAGAG
ATGGAATTAAAAGACTTACACCAGCCTAAAAGGAAGCTTACTCCTTGGAAACATCAAAGGCTTGGGAAGG
TGAATTCCGAATATAGAGCAAAATTTCTGAGCCCAGCTCAGTATTTATATAAAGCTGGGGCTTGGACACA
TGTAAAGGGAAACATGCCAAATCAGGTTAAAGAACTCCGAGAAAAGGCTGAGTTTTATAGGAAGCGAGTT
CAGGGGACGCATTTTTCTCGGGACCATCTGAATCAGATTTTATCTGATAGCAACTGCTGTTGGGATGTCT
CCTCAACCACAAGCTCAGAAGGAACCGTTAGTAGCAACATCAGAGCATTAGATCTTGCTGGAGATCCTAC
AAGCCATAAGACTTTGCAGAAATGTCCTTCTACAGAACCAGAAGAAAAAGGAAATATCGTGGAAGAACAG
CCCCAGAAAAATACCACGGAGAAATTGGGTGTGTCAGCTCCCACCATACCCGTTAGAAGGCGGCTGGCTT
GGGATACAGAGAACACAAGTGAAGACGTACAGAAACAGCCCGGGGAGAAAGAGGAGGAGGACGACAATGA
AGAGGAAGGGGACAGGAAAACGGGCAAGCAGGCTTTTATGGGAGAGCAAGAGAAGTTGGATGTACGTGAG
AAATCTAAGGCAGATAAGATGAAAGAAGGGTCAGATTCTTCTGTATCCTCAGAAAAAGGAGGCCGGCTTC
CTACTCCCAAGCTGAGAGAACTTGGTGGAATCCAGAGGACTCATCATGATCTCACTACTCCAGCTGTTGG
TGGTGCTGTTTTAGTGTCTCCATCTAAGATGAAGCCTCCAGCCCCAGAACAGAGGAAAAGAATGACCTCT
CAGGATTGTTTAGAAACTTCAAAGAATGATTTTACTAAGAAAGAAAGTCGTGCTGTATCCCTACTGACTT
CTCCAGCTGCTGGTATAAAAACAGTTGATCCTCTGCCTTTGCGGGAAGATTCTGAAGACAATATCCACAA
ATTTGCTGAGGCAACTCTTCCAGTTTCAAAAATTCCAAAATACCCAACAAATCCCCCTGGACAGTTGCCT
TCTCCACCACATGTTCCATCCTACTGGCATCCCTCTCGACGAATTCAGGGCTCTCTTAGAGATCCAGAGT
TTCAGCACAATGTGGGAAAAGCAAGGATGAACAATTTGCAGTTACCTCAACATGAAGCCTTTAATGATGA
AGATGAGGACAGATTGTCTGAGATTTCTGCTCGCTCTGCAGCTTCTAGTCTCCGGGCTTTTCAAACTCTG
GCACGAGCTAAGAAAAGGAAGGAGAATTTCTGGGGTAAAACATAA

Translation (714 aa):
MPVRFKGLSEYQRNFLWKKSYLSESCNSSVGRKYPWAGLRSDQLGITKEPSFISKRRVPYHDPQISKSLE
WNGAISESNVVASPEPEAPETPKSQEAEQKDVTQERVHSLEASRVPKRTRSHSADSRAEGASDVENNEGV
TNHTPVNENVELEHSTKVLSENVDNGLDRLLRKKAGLTVVPSYNALRNSEYQRQFVWKTSKETAPAFAAN
QVFHNKSQFVPPFKGNSVIHETEYKRNFKGLSPVKEPKLRNDLRENRNLETVSPERKSNKIDDRLKLEAE
MELKDLHQPKRKLTPWKHQRLGKVNSEYRAKFLSPAQYLYKAGAWTHVKGNMPNQVKELREKAEFYRKRV
QGTHFSRDHLNQILSDSNCCWDVSSTTSSEGTVSSNIRALDLAGDPTSHKTLQKCPSTEPEEKGNIVEEQ
PQKNTTEKLGVSAPTIPVRRRLAWDTENTSEDVQKQPGEKEEEDDNEEEGDRKTGKQAFMGEQEKLDVRE
KSKADKMKEGSDSSVSSEKGGRLPTPKLRELGGIQRTHHDLTTPAVGGAVLVSPSKMKPPAPEQRKRMTS
QDCLETSKNDFTKKESRAVSLLTSPAAGIKTVDPLPLREDSEDNIHKFAEATLPVSKIPKYPTNPPGQLP
SPPHVPSYWHPSRRIQGSLRDPEFQHNVGKARMNNLQLPQHEAFNDEDEDRLSEISARSAASSLRAFQTL
ARAKKRKENFWGKT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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