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Report for CCDS88655.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
88655.1 Public Mus musculus 14 Vmn2r88 23 108 98 CCDS HistoryNCBI Gene:669149Re-query CCDS DB by CCDS ID:88655.1Re-query CCDS DB by GeneID:669149See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 88655.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000163019.8 ENSMUSP00000124837.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000163019.8Link to Ensembl Protein Viewer:ENSMUSP00000124837.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000163019Re-query CCDS DB by Protein ID:ENSMUSP00000124837
Original member Current member EBI ENSMUST00000233651.1 ENSMUSP00000156606.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000233651.1Link to Ensembl Protein Viewer:ENSMUSP00000156606.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000233651Re-query CCDS DB by Protein ID:ENSMUSP00000156606
Original member Current member NCBI NM_001368934.1 NP_001355863.1 Accepted alive Link to Nucleotide Sequence:NM_001368934.1Link to Protein Sequence:NP_001355863.1Re-query CCDS DB by Nucleotide ID:NM_001368934Re-query CCDS DB by Protein ID:NP_001355863Link to BLAST:NP_001355863.1

Chromosomal Locations for CCDS 88655.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 51411001 51411206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51413038 51413320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51413720 51414523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51417975 51417995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1314 nt):
ATGAAGCAGCTCTGTGCTTTCACTATTTCATTTTTGTTTCTGAAGTTTTCTCTCATCTTGTGCTGTTTGA
CTGAAGCAAGTTGCTTTTGGAGGATAAAGAATAGTGAAGATAATGATGGAGATTTGCAAAGGGAATGTCA
TTTTTACCTTGGGGCAGTTGATAAACCAATTGAAGATAATTTTTATAATTCACTTTTAAAGTTTAGAATT
GCAGCAAGTGAATATGAGTTTCTTCTGGTAATGTTTTTTGCTACTGATGAGATCAACAAGAATCCTTATC
TTTTACCCAACATAACTTTGATGTTCTCCATCATTGGTGGAAACTGTCATGATTTATTGAGAGGTTTGGA
TCAAGCATATACACAAATAAATGGACATATGAATTTTGTTAATTATTTCTGTTATTTAGATGATTCATGT
GCCATAGGTCTTACAGGACCATCATGGAAAACATCCTTAAAACTGGCAATGCATTCTTCAATGCCACTGG
TTTTCTTTGGATCATTTAATCCTAACCTACATGACCATGACCGGCTGCACCATGTCCATCAAGTAGCCAC
CAAGGACACACATTTGTCCCATGGCATTGTCTCCTTGATGTTTCATTTTAGATGGACTTGGATAGGACTG
GTCATCTCAGATGATGACAAGGGTATTCAGTTTCTCTCAGATTTAAGAGAAGAAAGCCAAAGGCATGGGA
TCTGTTTAGCTTTTGTTAATATGATCCCAGAAAACATGCAGATATACATGACAAGGGCTACAATATATGA
TAAACAAATTATGACGTCTTTAGCAAAAGTTGTTATCATTTATGGTGAAATGAACTCTACACTAGAAGTA
AGCTTTAGAAGATGGGAAAATTTAGGTGCTCGGAGAATCTGGATCACAACCTCACAATGGGATGTCATCA
CAAATAAAAAAGAATTCACCCTTAATCTCTTCCATGGGACTATTACTTTTGCACACCGCAGATTTGAGAT
TCCTAAATTTAAAAAATTTATGCAAACAATGAACACTGCCAAATACCCAGTAGATATTTCTCATACTATA
TTGGAGTGGAATTATTTTAATTGTTCAATCTCTAAGAACAGCAGTAAAATGGATCATATTACATTCAACA
ACACATTGGAATGGACAGCACTGCACAACTATGATATGGTGATGAGTGATGAAGGTTACAATTTGTATAA
TGCTGTTTATGCTGTGGCCCACACCTACCATGAACATATTTTTCAACAAGTAGAGTCTCAGAAAAAGGCA
AAACCCAAAAGATTTTTCACTGTTTGTCAGCAGCAGATATGGAACAGTGTGTGA

Translation (437 aa):
MKQLCAFTISFLFLKFSLILCCLTEASCFWRIKNSEDNDGDLQRECHFYLGAVDKPIEDNFYNSLLKFRI
AASEYEFLLVMFFATDEINKNPYLLPNITLMFSIIGGNCHDLLRGLDQAYTQINGHMNFVNYFCYLDDSC
AIGLTGPSWKTSLKLAMHSSMPLVFFGSFNPNLHDHDRLHHVHQVATKDTHLSHGIVSLMFHFRWTWIGL
VISDDDKGIQFLSDLREESQRHGICLAFVNMIPENMQIYMTRATIYDKQIMTSLAKVVIIYGEMNSTLEV
SFRRWENLGARRIWITTSQWDVITNKKEFTLNLFHGTITFAHRRFEIPKFKKFMQTMNTAKYPVDISHTI
LEWNYFNCSISKNSSKMDHITFNNTLEWTALHNYDMVMSDEGYNLYNAVYAVAHTYHEHIFQQVESQKKA
KPKRFFTVCQQQIWNSV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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