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Report for CCDS88302.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
88302.1 Public Mus musculus 12 Cenpo 23 108 98 CCDS HistoryNCBI Gene:52504Re-query CCDS DB by CCDS ID:88302.1Re-query CCDS DB by GeneID:52504See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 88302.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000020981.11 ENSMUSP00000020981.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000020981.11Link to Ensembl Protein Viewer:ENSMUSP00000020981.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000020981Re-query CCDS DB by Protein ID:ENSMUSP00000020981
Original member Current member NCBI NM_001361641.1 NP_001348570.1 Accepted alive Link to Nucleotide Sequence:NM_001361641.1Link to Protein Sequence:NP_001348570.1Re-query CCDS DB by Nucleotide ID:NM_001361641Re-query CCDS DB by Protein ID:NP_001348570Link to BLAST:NP_001348570.1

Chromosomal Locations for CCDS 88302.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 4214494 4214630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 4215259 4215430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 4216519 4216743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (534 nt):
ATGTGCATCAGCACAGCCTTTGAGGGGAACCTACTAGATTCCTACTTTGTGGACCTCGTCATAGAGAAAC
CACTCCGGATTCATCACCATTCCGTCCCAGTCTTCATCCCTCTGGAAAAGATAGCCGCAGCACACCTACA
GACTGATGTTCAGCGCTTCCTGTTTAGACTCTGGGAATACCTAAATGCCTACGCGGGGAGGAAGTACCAG
GCAGACCAACTTGAGAGTGACTTCTGCGATGTCCTCACGGGACCTTTGCAGAGAAACGCCCTGTGCAACT
TGCTGTCGTTCACCTATAAAGTGGAACAGAGATGCCAGACCTTCTCCTTCAGTGCCAGGTTGCTGTATGA
GGACCCCACAGCAGCTCTTCCCACGAATGTCACTGTGACAAGGCCAGGTGTGGAGGCATCATCCCCTCCT
TGGGAAGAGCACAGAGCATCCCATCAGATGCTCTTCCGTACCAAGCCCCTGCACAAGGTGTTTGCTTCAT
TTTCCAAAGAAACCGAAAAGCTGCATTTGAACCTGGTCTCCTGA

Translation (177 aa):
MCISTAFEGNLLDSYFVDLVIEKPLRIHHHSVPVFIPLEKIAAAHLQTDVQRFLFRLWEYLNAYAGRKYQ
ADQLESDFCDVLTGPLQRNALCNLLSFTYKVEQRCQTFSFSARLLYEDPTAALPTNVTVTRPGVEASSPP
WEEHRASHQMLFRTKPLHKVFASFSKETEKLHLNLVS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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