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Report for CCDS87768.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87768.1 Public Homo sapiens X TIMM8A 24 110 108 CCDS HistoryNCBI Gene:1678Re-query CCDS DB by CCDS ID:87768.1Re-query CCDS DB by GeneID:1678See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87768.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000645279.1 ENSP00000494239.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000645279.1Link to Ensembl Protein Viewer:ENSP00000494239.1Re-query CCDS DB by Nucleotide ID:ENST00000645279Re-query CCDS DB by Protein ID:ENSP00000494239
Original member Current member EBI ENST00000644112.2 ENSP00000494385.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000644112.2Link to Ensembl Protein Viewer:ENSP00000494385.1Re-query CCDS DB by Nucleotide ID:ENST00000644112Re-query CCDS DB by Protein ID:ENSP00000494385
Original member Current member NCBI NM_001145951.2 NP_001139423.1 Accepted alive Link to Nucleotide Sequence:NM_001145951.2Link to Protein Sequence:NP_001139423.1Re-query CCDS DB by Nucleotide ID:NM_001145951Re-query CCDS DB by Protein ID:NP_001139423Link to BLAST:NP_001139423.1

Chromosomal Locations for CCDS 87768.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 101348387 101348401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101348533 101348664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (147 nt):
ATGGATTCCTCCTCCTCTTCCTCCGCGGCGGGTTTGGGTGCAGTGGACCCGCAGTTGCAGCATTTCATCG
AGGTAGAGACTCAAAAGCAGCGCTTCCAGCAGCTGGTGCACCAGATGACTGAACTTTGTTGGGTTCCTGT
GGCCTAG

Translation (48 aa):
MDSSSSSSAAGLGAVDPQLQHFIEVETQKQRFQQLVHQMTELCWVPVA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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