NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS86803.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86803.1 Public Homo sapiens 19 ZNF525 24 110 108 CCDS HistoryNCBI Gene:170958Re-query CCDS DB by CCDS ID:86803.1Re-query CCDS DB by GeneID:170958See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86803.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000467003.1 ENSP00000419136.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000467003.1Link to Ensembl Protein Viewer:ENSP00000419136.1Re-query CCDS DB by Nucleotide ID:ENST00000467003Re-query CCDS DB by Protein ID:ENSP00000419136
Original member Current member NCBI NM_001348157.2 NP_001335086.1 Accepted alive Link to Nucleotide Sequence:NM_001348157.2Link to Protein Sequence:NP_001335086.1Re-query CCDS DB by Nucleotide ID:NM_001348157Re-query CCDS DB by Protein ID:NP_001335086Link to BLAST:NP_001335086.1

Chromosomal Locations for CCDS 86803.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 53375863 53375896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 53380722 53382019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1332 nt):
ATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGGTATCTCTTCCAAATGCACAATGAAGGAGTTCTCAT
CAACAGCACAAGGCAATACAGAAGTGATCCACACAGGGACATTGCAAAGACATGAACGTCATCACATTGG
AGATTTTTCCTTCCAGGAAATTGAGAAAGATATTCATAACTTTGAGTTTCAGTGGCAAGAAGATGAAAGA
AATGGCCATGAAGCACCCATGACAAAAATCAAAAAATTGATGGGTAGTACAGAGCAATATGATCACAGGC
ATGCTGGAAACAAGCCTATTAAATATCAGCTTGGATCAAGCTTTCATTCACATCTGTCTGAACTCCACAT
ATTTCAGCCCAAAGGGAAAATTAATAATCAAGTGGAGAAGTCTATCAACGATGCTTCCTCGGTTTCAACA
GCCCAAAGAATTTCTTGTAGGCCCAAAACCCATATATCTAATAACTATGGGGATAATTTTCTGAATTATT
CATTACTCACACAAAGACAGGAAGTACGCATGAGAGAAAAATCTTTCCAATGTATTGAGAGTGGCAAAGC
CTTTAATTATAGCTCACTCTTAAGGAAACATCAGATTATTCATCTAGGAGAGAAACAATATAAATGTGAT
GTATGTGACAAGGTCTTTATTCGGAAGCGATACCTTGCACGCCATCGTAGATGTCACACTGGTGAGAAAC
CTTACAAGTGTAATGAGTGTGGCAAGTCCTTCAGTCAGATGTCATCCCTTACATATCATCATCGACTTCA
TACTGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAGCTTTCAGACACAATTCAGCCCTTCAAAGA
CATAGGAGAATTCATACTGGAGAGAAACCACATAAGTGTAATGAGTGTGGCAAGACCTTTAGTCAGAAGT
CATACCTTGCATGCCATCGTAGCATTCATACTGGAAAGAAACCTTACGAATGTGAAGAATGTGACAAAGC
TTTCAGTTTCAAATCAAACCTTGAAAGTCATAGGATAACTCATACTGGAGAGAAACCATACAAGTGTAAT
GATTGTGGCAAGACCTTCAGTCATATGTCAACCCTTACATGCCATCGTAGACTTCATACTGGAGAGAAAC
CTTACAAGTGTGAAGAATGTGATGAAGCTTTCCGTTTCAAATCAAGTCTTGAAAGACATAGGAGAATTCA
TAATGGAGAGAAACTGTACAAATGTAATGAGTGTGGCAAGACCTTCAGTCAGGAGTTATCCCTTACCTGC
CATTGTAGACTTCATAGTGGAGAGAAACCTTGCAAGTGTGGAGAATGTGACAAGGCTTACAGTTTCAAAT
AA

Translation (443 aa):
MLENYRNLVSLGISSKCTMKEFSSTAQGNTEVIHTGTLQRHERHHIGDFSFQEIEKDIHNFEFQWQEDER
NGHEAPMTKIKKLMGSTEQYDHRHAGNKPIKYQLGSSFHSHLSELHIFQPKGKINNQVEKSINDASSVST
AQRISCRPKTHISNNYGDNFLNYSLLTQRQEVRMREKSFQCIESGKAFNYSSLLRKHQIIHLGEKQYKCD
VCDKVFIRKRYLARHRRCHTGEKPYKCNECGKSFSQMSSLTYHHRLHTGEKPYKCEECDKAFRHNSALQR
HRRIHTGEKPHKCNECGKTFSQKSYLACHRSIHTGKKPYECEECDKAFSFKSNLESHRITHTGEKPYKCN
DCGKTFSHMSTLTCHRRLHTGEKPYKCEECDEAFRFKSSLERHRRIHNGEKLYKCNECGKTFSQELSLTC
HCRLHSGEKPCKCGECDKAYSFK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH