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Report for CCDS8654.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8654.1 Public Homo sapiens 12 APOLD1 24 110 108 CCDS HistoryNCBI Gene:81575Re-query CCDS DB by CCDS ID:8654.1Re-query CCDS DB by GeneID:81575See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 8654.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000356591.5 ENSP00000348998.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000356591.5Link to Ensembl Protein Viewer:ENSP00000348998.4Re-query CCDS DB by Nucleotide ID:ENST00000356591Re-query CCDS DB by Protein ID:ENSP00000348998
Original member Current member NCBI NM_030817.3 NP_110444.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_030817.3Link to Protein Sequence:NP_110444.3Re-query CCDS DB by Nucleotide ID:NM_030817Re-query CCDS DB by Protein ID:NP_110444Link to BLAST:NP_110444.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_110444.3 248 Q96LR9-2 248 100% 0 0

Chromosomal Locations for CCDS 8654.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 12785692 12785694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 12786909 12787652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (747 nt):
ATGGGAATGGAGAGGCCGGCGGCCCGGGAGCCGCATGGGCCCGACGCGCTGCGGCGCTTCCAGGGACTGC
TGCTGGACCGCCGAGGCCGGCTGCACGGCCAGGTGCTGCGCCTGCGCGAGGTGGCCCGGCGCCTGGAGCG
CCTGCGCAGGCGCTCCCTCGTAGCCAACGTGGCCGGCAGCTCGCTGAGCGCAACGGGCGCCCTCGCCGCC
ATCGTGGGGCTCTCGCTCAGCCCGGTCACCCTGGGGACCTCGCTGCTGGTGTCGGCCGTGGGGCTGGGGG
TGGCCACAGCCGGAGGGGCCGTCACCATCACGTCCGATCTCTCGCTGATCTTCTGCAACTCCCGGGAGCT
GCGGAGGGTGCAGGAGATCGCGGCCACCTGCCAGGACCAGATGCGAGAGATCCTGAGCTGCCTCGAGTTT
TTCTGCCGCTGGCAGGGCTGCGGGGACCGCCAGCTGCTGCAGTGCGGGAGGAACGCCTCCATCGCCCTGT
ACAATTCTGTCTACTTCATCGTCTTCTTTGGCTCACGTGGCTTCCTCATCCCCAGGCGGGCGGAGGGGGA
CACCAAGGTTAGCCAGGCCGTGCTGAAGGCCAAGATTCAGAAACTGGCCGAGAGCCTGGAGTCCTGCACC
GGGGCTCTGGACGAACTCAGCGAGCAGCTGGAGTCTCGGGTTCAGCTCTGCACCAAGTCCAGTCGTGGCC
ACGACCTCAAGATCTCTGCTGACCAGCGTGCAGGGCTGTTTTTCTGA

Translation (248 aa):
MGMERPAAREPHGPDALRRFQGLLLDRRGRLHGQVLRLREVARRLERLRRRSLVANVAGSSLSATGALAA
IVGLSLSPVTLGTSLLVSAVGLGVATAGGAVTITSDLSLIFCNSRELRRVQEIAATCQDQMREILSCLEF
FCRWQGCGDRQLLQCGRNASIALYNSVYFIVFFGSRGFLIPRRAEGDTKVSQAVLKAKIQKLAESLESCT
GALDELSEQLESRVQLCTKSSRGHDLKISADQRAGLFF


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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