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Report for CCDS85765.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
85765.1 Public Mus musculus X Ube2a 23 108 98 CCDS HistoryNCBI Gene:22209Re-query CCDS DB by CCDS ID:85765.1Re-query CCDS DB by GeneID:22209See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 85765.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000202991.3 ENSMUSP00000144242.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000202991.3Link to Ensembl Protein Viewer:ENSMUSP00000144242.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000202991Re-query CCDS DB by Protein ID:ENSMUSP00000144242
Original member Current member NCBI NM_001313696.1 NP_001300625.1 Accepted alive Link to Nucleotide Sequence:NM_001313696.1Link to Protein Sequence:NP_001300625.1Re-query CCDS DB by Nucleotide ID:NM_001313696Re-query CCDS DB by Protein ID:NP_001300625Link to BLAST:NP_001300625.1

Chromosomal Locations for CCDS 85765.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 36874486 36874529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 36874711 36874791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 36875167 36875192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 36881657 36881746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 36882608 36882687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 36883012 36883140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (450 nt):
ATGTCGACCCCGGCCCGGCGCCGCCTCATGAGGGACTTCAAGAGGTTACAGGAAGATCCTCCGGCCGGAG
TGAGCGGGGCTCCGTCGGAGAACAACATAATGGTTTGGAATGCGGTCATTTTTGGGCCCGAAGGGACCCC
GTTTGAGGATGGAACATTTAAGCTTACAATTGAATTCACTGAAGAGTATCCTAATAAGCCACCTACTGTT
AGATTTGTCTCTAAGATGTTCCATCCTAACGATGGTAGTATATGTCTGGATATACTTCAGAACCGTTGGA
GTCCAACCTATGATGTGTCTTCCATTTTAACGTCCATACAGTCTCTATTGGATGAACCTAATCCCAATAG
TCCAGCAAACAGCCAGGCTGCCCAGCTGTACCAGGAGAACAAGCGGGAATATGAAAAGCGTGTTTCTGCA
ATAGTAGAACAAAGCTGGCGCGACTGTTGA

Translation (149 aa):
MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTV
RFVSKMFHPNDGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSA
IVEQSWRDC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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