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Report for CCDS85722.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
85722.1 Public Mus musculus 9 Mapkapk3 23 108 98 CCDS HistoryNCBI Gene:102626Re-query CCDS DB by CCDS ID:85722.1Re-query CCDS DB by GeneID:102626See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 85722.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000192054.1 ENSMUSP00000141342.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000192054.1Link to Ensembl Protein Viewer:ENSMUSP00000141342.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000192054Re-query CCDS DB by Protein ID:ENSMUSP00000141342
Original member NCBI NM_001316691.1 NP_001303620.1 Updated not alive Link to Nucleotide Sequence:NM_001316691.1Link to Protein Sequence:NP_001303620.1Re-query CCDS DB by Nucleotide ID:NM_001316691Re-query CCDS DB by Protein ID:NP_001303620
Current member NCBI NM_001316691.2 NP_001303620.1 Accepted alive Link to Nucleotide Sequence:NM_001316691.2Link to Protein Sequence:NP_001303620.1Re-query CCDS DB by Nucleotide ID:NM_001316691Re-query CCDS DB by Protein ID:NP_001303620Link to BLAST:NP_001303620.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001303620.1 266 Q3UMW7-3 266 100% 0 0

Chromosomal Locations for CCDS 85722.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 107256326 107256335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107257062 107257142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107258814 107258889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107260045 107260168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107261878 107261957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107262423 107262487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107263625 107263764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107289120 107289344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (801 nt):
ATGGATGGCGAGACAGCAGGGGAGAAGGGGAGTCTTGTGCCCCCGCCAGGTGCGCTCGGCGGGTCCGCCT
TGGGTGGTGCTCCGGCCCCAGGTGTGCGACGGGAACCCAAGAAGTACGCGGTGACTGATGACTACCAGTT
GTCCAAGCAAGTGCTGGGTCTGGGTGTGAACGGCAAGGTACTGGAGTGCTACCATCGGCGCTCTGGCCAG
AAGTGTGCCCTGAAGCTCCTGTATGACAGCCCCAAGGCCCGGCAGGAGGTGGACCACCACTGGCAGGCGT
CAGGCGGCCCCCACATCGTGCGCATCCTGGACGTGTATGAGAATATGCACCACGGCAAGCGCTGTCTCCT
CATTGTCATGGAATGCATGGAGGGTGGTGAGCTGTTCAGCAGGATTCAGGAGCGTGGTGACCAGGCTTTC
ACTGAGAGAGAGGCTGCAGAGATAATGCGGGACATTGGCACTGCCATCCAGTTCTTGCACAGCCGGAACA
TTGCCCACCGAGATGTCAAGCCTGAAAACCTACTCTATACATCCAAGGAGAAGGATGCTGTACTTAAACT
CACCGATTTTGGCTTTGCCAAGGAAACCACCCAAAATGCCCTCCAGACACCCTGCTACACTCCCTATTAT
GTGGCTCCTGAGGTCCTGGGTCCAGAGAAGTATGACAAGTCCTGTGATATGTGGTCCCTGGGCGTCATCA
TGTACATCCTCAATCCATGGTGGTCCCACAGACCCCACTCTACACAGCCCGAGTGCTCCAGGAAGACAAA
GATCACTGGGATGACGTCAAGGAAGAGATGA

Translation (266 aa):
MDGETAGEKGSLVPPPGALGGSALGGAPAPGVRREPKKYAVTDDYQLSKQVLGLGVNGKVLECYHRRSGQ
KCALKLLYDSPKARQEVDHHWQASGGPHIVRILDVYENMHHGKRCLLIVMECMEGGELFSRIQERGDQAF
TEREAAEIMRDIGTAIQFLHSRNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYY
VAPEVLGPEKYDKSCDMWSLGVIMYILNPWWSHRPHSTQPECSRKTKITGMTSRKR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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