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Report for CCDS85708.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
85708.1 Public Mus musculus 9 Adamts7 23 108 98 CCDS HistoryNCBI Gene:108153Re-query CCDS DB by CCDS ID:85708.1Re-query CCDS DB by GeneID:108153See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 85708.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000113059.7 ENSMUSP00000108682.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113059.7Link to Ensembl Protein Viewer:ENSMUSP00000108682.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000113059Re-query CCDS DB by Protein ID:ENSMUSP00000108682
Original member Current member NCBI NM_001326351.1 NP_001313280.1 Accepted alive Link to Nucleotide Sequence:NM_001326351.1Link to Protein Sequence:NP_001313280.1Re-query CCDS DB by Nucleotide ID:NM_001326351Re-query CCDS DB by Protein ID:NP_001313280Link to BLAST:NP_001313280.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001313280.1 1657 Q68SA9-1 1657 100% 0 0

Chromosomal Locations for CCDS 85708.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 90163245 90163314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90171474 90171829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90173622 90173787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90174472 90174650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90177783 90177866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90178153 90178277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90179323 90179472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90180625 90180771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90185736 90185880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90186460 90186552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90186922 90187067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90188269 90188438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90188659 90188792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90189619 90189739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90190848 90191092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90191365 90191500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90191836 90191962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90192381 90192594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90192899 90194269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90195158 90195310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90195677 90195850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90195931 90196077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90197000 90197162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90199714 90199871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4974 nt):
ATGCACCGTGGTCCGAGTCTCCTCCTGATCCTGTGCGCTCTGGCGTCCCGCGTCCTCGGACCTGCATCAG
GTCTTGTGACTGAGGGCCGGGCGGGTTTGGACATCGTGCACCCGGTGCGAGTGGATGCTGGAGGCTCCTT
CCTGTCCTATGAGCTGTGGCCACGGGTGCTGCGCAAGCGCGATGTGTCCACCACGCAGGCTTCGTCTGCT
TTCTACCAGCTGCAGTACCAAGGGCGGGAACTGCTTTTCAACTTGACCACCAACCCTTATCTGATGGCTC
CCGGCTTTGTGAGTGAGATTCGACGTCACAGCACTTTAGGCCATGCGCACATCCAAACCAGTGTCCCAAC
CTGCCATTTGCTTGGTGATGTCCAGGACCCGGAGCTGGAAGGAGGCTTTGCAGCCATTAGCGCCTGCGAT
GGCCTAAGAGGTGTGTTCCAGCTCTCCAATGAGGACTACTTCATTGAGCCTCTGGATGGAGTTTCAGCTC
AGCCTGGACATGCCCAGCCCCATGTGGTATACAAGCACCAAGGCTCTAGGAAGCAGGCCCAGCAGGGTGA
CTCAAGGCCTTCAGGCACCTGTGGGATGCAAGTGCCCCCAGATCTGGAGCAGCAGCGAGAACATTGGGAA
CAGCAGCAGCAGAAACGGAGGCAGCAGCGATCAGTCAGCAAAGAGAAGTGGGTGGAGACCCTGGTAGTGG
CTGATTCCAAGATGGTCGAGTACCATGGGCAGCCGCAAGTGGAGAGCTATGTGCTGACGATCATGAACAT
GGTGGCTGGACTCTTTCATGATCCAAGCATTGGGAACCCCATTCACATCAGCATTGTGCGCCTTATCATA
CTGGAAGACGAGGAGAAGGACTTAAAGATCACACACCATGCCGAAGAGACTCTGAAGAACTTCTGTAGGT
GGCAGAAGAACATTAACATAAAGGGGGATGACCACCCACAGCACCATGACACTGCCATCCTGCTCACCAG
GAAGGATTTGTGTGCGTCCATGAACCAGCCATGTGAAACCCTGGGCCTGTCTCATGTGTCTGGCTTGTGC
CACCCTCAGCTCAGCTGTAGCGTCAGTGAGGATACTGGCATGCCACTGGCCTTCACTGTGGCCCACGAGC
TAGGACACAGTTTTGGCATTCAGCATGACGGCACCGGCAATGACTGTGAATCCATTGGGAAACGGCCTTT
CATCATGTCTCCACAGCTCCTGTATGACAGAGGCATTCCTCTTACCTGGTCCCGATGCAGCCGCGAGTAC
ATCACCAGGTTCCTTGACCGTGGGTGGGGCCTGTGCTTAGATGACCGTCCATCCAAGGATGTCATTGCAC
TCCCCTCGGTGTTGCCCGGTGTCCTGTATGATGTGAACCACCAGTGCCGCCTTCAGTATGGGTCTCACTC
TGCCTACTGTGAGGACATGGATGATGTCTGCCACACACTATGGTGCTCTGTGGGGACCACCTGTCACTCC
AAGCTGGATGCGGCTGTGGATGGCACGAGCTGTGGGAAGAATAAGTGGTGTCTCAAAGGAGAGTGCGTCC
CTGAGGGCTTCCAGCCCGAGGCGGTGGACGGTGGCTGGTCCGGTTGGAGTGCCTGGTCTGACTGCTCGAG
GAGCTGTGGCGTGGGTGTACGGAGTTCTGAACGACAGTGCACGCAGCCTGTGCCTAAGAACAGAGGCAAG
TACTGTGTGGGGGAGAGGAAGCGGTCCCAGCTCTGCAACCTGCCAGCCTGCCCGCCGGACCGTCCCTCTT
TCCGTCACACCCAGTGTAGCCAGTTTGATGGCATGCTGTACAAGGGCAAGCTCCATAAATGGGTGCCTGT
GCCCAATGACGACAACCCCTGTGAGCTGCACTGCCGGCCTTCCAACTCCTCCAATACAGAGAAGCTGAGG
GATGCTGTGGTGGATGGCACCCCTTGCTACCAAAGCCGCATCAGCCGTGACATCTGCCTCAACGGCATCT
GTAAGAACGTGGGCTGCGACTTTGTGATTGACTCTGGTGCTGAGGAGGACCGCTGTGGCGTGTGCCGGGG
GGATGGCTCTACTTGCCAGACTGTGAGCAGGACCTTCAAGGAGACTGAAGGCCAGGGGTATGTGGATATA
GGGCTGATCCCAGCCGGAGCCAGAGAGATTCTTATTGAGGAGGTGGCTGAGGCTGCCAACTTCCTGGCCC
TGCGGAGTGAGGACCCAGATAAGTACTTCCTCAATGGAGGCTGGACCATCCAGTGGAATGGAGACTACCG
AGTGGCAGGCACTACCTTCACCTATGCACGGAAGGGCAACTGGGAGAATCTCACATCCCCAGGCCCCACC
AGTGAGCCTGTCTGGATCCAGCTGCTGTTCCAGGAGAAGAACCCTGGGGTACACTACCAGTATACCATCC
AGAGGGACAGCCATGATCAAGTCCGACCACCTGAGTTCTCCTGGCATTATGGGCCCTGGAGCAAGTGCAC
GGTCACTTGTGGCACAGGCGTGCAGAGGCAGAGCTTATACTGCATGGAGAGGCAGGCTGGGGTTGTTGCT
GAGGAATACTGTAACACTCTAAATCGGCCCGATGAACGCCAGAGAAAATGCAGTGAGGAGCCCTGTCCCC
CCAGGTGGTGGGCAGGGGAGTGGCAGCCATGTTCCCGATCCTGCGGGCCCGAAGGCCTCTCTCGCCGGGC
TGTGTTCTGCATACGTAGTATGGGGCTGGATGAGCAGCGTGCTCTTGAGCTATCTGCCTGCGAACATCTT
CCCCGTCCCCTGGCTGAAACCCCGTGCAACCGTCATGTAATCTGTCCTTCCACTTGGGGTGTGGGGAACT
GGTCTCAGTGCTCTGTGACATGTGGAGCTGGCATTCGGCAACGAAGTGTCCTCTGCATCAACAACACTGA
TGTCCCCTGTGATGAAGCTGAGCGACCAATAACTGAGACCTTTTGTTTTCTGCAACCCTGCCAGTATCCC
ATGTACATAGTGGACACAGGTGCCTCTGGAAGCGGCTCCTCCAGCCCCGAGCTCTTCAATGAGGTTGACT
TCATCCCGAACCAGCTGGCCCCACGACCTTCCCCAGCATCCTCACCCAAGCCGGTCAGCATCAGCAACGC
TATTGATGAGGAGGAACTAGATCCGCCAGGGCCCGTGTTTGTGGATGATTTCTATTATGACTACAATTTC
ATTAACTTCCATGAAGACCTGTCCTATGGGTCCTTTGAAGAACCCCATCCAGACCTGGTTGATAATGGGG
GTTGGACAGCACCACCTCACATCAGACCCACTGAATCTCCCTCAGATACCCCAGTACCTACTGCAGGGGC
TCTTGGAGCTGAGGCAGAAGACATTCAGGGATCTTGGTCTCCTAGCCCCTTACTCAGTGAGGCTAGCTAT
TCCCCACCAGGATTAGAGCAGACCTCCATCAACCCCCTGGCCAATTTCTTGACTGAGGAAGATACTCCCA
TGGGGGCCCCTGAACTTGGATTCCCCAGCTTGCCCTGGCCCCCTGCTTCAGTTGATGATATGATGACACC
TGTTGGCCCTGGAAACCCTGATGAGTTGCTAGTGAAAGAAGATGAGCAGAGCCCACCATCCACTCCATGG
TCTGATAGGAACAAACTTTCTACAGATGGTAACCCCTTGGGTCATACATCCCCTGCCCTGCCCCAAAGCC
CTATCCCCACACAGCCCTCTCCACCCTCCATCAGTCCTACCCAAGCTTCTCCGAGTCCTGATGTGGTGGA
GGTGTCGACAGGATGGAATGCGGCCTGGGACCCTGTGCTAGAGGCTGACCTGAAGCCCGGACACGGTGAG
CTGCCGTCCACTGTGGAGGTGGCTTCTCCTCCACTTCTTCCCATGGCCACTGTGCCAGGCATCTGGGGCA
GGGACAGCCCTCTTGAACCAGGAACGCCTACCTTTTCCAGCCCAGAACTGAGCTCACAGCACCTAAAAAC
TCTGACAATGCCTGGGACCTTGCTTTTGACAGTACCAACTGACCTGAGGAGCCCGGGACCATCGGGCCAG
CCACAGACCCCTAACCTTGAGGGAACCCAGAGCCCTGGGTTGCTGCCTACACCAGCTCGGGAGACTCAAA
CTAACAGTAGCAAGGACCCCGAGGTCCAGCCTTTGCAGCCCAGCCTAGAGGAGGATGGTGACCCCGCAGA
TCCACTGCCTGCCAGGAATGCCAGCTGGCAAGTAGGAAACTGGAGCCAGTGTTCCACCACCTGTGGCCTG
GGCGCCATCTGGAGGCTAGTGAGCTGCAGCTCTGGCAATGACGAGGACTGCACCCTCGCTAGCCGTCCCC
AGCCTGCCCGCCATTGTCATCTGAGGCCCTGTGCTGCCTGGCGCACGGGCAACTGGAGTAAGTGCTCTCG
AAACTGTGGTGGAGGTTCCTCTACAAGGGATGTACAGTGTGTGGATACACGGGACCTCCGGCCACTGCGG
CCCTTTCACTGCCAGCCCGGGCCTACCAAGCCACCCAACCGTCAGCTCTGTGGGACCCAGCCCTGCCTCC
CCTGGTACACCTCCTCCTGGAGAGAGTGTTCCGAGGCTTGTGGTGGTGGTGAACAGCAGCGACTGGTGAC
ATGTCCAGAGCCAGGGCTCTGTGAGGAGTCGCTGAGACCCAACAACAGCAGGCCCTGCAACACCCACCCC
TGCACACAGTGGGTGGTAGGGCCCTGGGGTCAGTGCTCAGCCCCCTGCGGTGGTGGTGTTCAGCGGCGTC
TGGTCAGATGTGTGAACACTCAGACCGGCTTGGCAGAGGAAGACAGTGACCTGTGTAGCCATGAGGCGTG
GCCTGAGAGCTCACGGCCATGTGCCACTGAGGACTGTGAACTGGTTGAACCCCCACGTTGTGAGCGGGAT
CGCCTGTCCTTCAATTTCTGTGAGACGCTGCGCCTGCTGGGCCGCTGCCAGCTGCCCACCATCCGCGCTC
AGTGCTGCCGTTCATGTCCCCCACTCAGTCGTGGTGTCCCTTCCCGAGGCCATCAGCGGGTAGCCAGACG
GTAA

Translation (1657 aa):
MHRGPSLLLILCALASRVLGPASGLVTEGRAGLDIVHPVRVDAGGSFLSYELWPRVLRKRDVSTTQASSA
FYQLQYQGRELLFNLTTNPYLMAPGFVSEIRRHSTLGHAHIQTSVPTCHLLGDVQDPELEGGFAAISACD
GLRGVFQLSNEDYFIEPLDGVSAQPGHAQPHVVYKHQGSRKQAQQGDSRPSGTCGMQVPPDLEQQREHWE
QQQQKRRQQRSVSKEKWVETLVVADSKMVEYHGQPQVESYVLTIMNMVAGLFHDPSIGNPIHISIVRLII
LEDEEKDLKITHHAEETLKNFCRWQKNINIKGDDHPQHHDTAILLTRKDLCASMNQPCETLGLSHVSGLC
HPQLSCSVSEDTGMPLAFTVAHELGHSFGIQHDGTGNDCESIGKRPFIMSPQLLYDRGIPLTWSRCSREY
ITRFLDRGWGLCLDDRPSKDVIALPSVLPGVLYDVNHQCRLQYGSHSAYCEDMDDVCHTLWCSVGTTCHS
KLDAAVDGTSCGKNKWCLKGECVPEGFQPEAVDGGWSGWSAWSDCSRSCGVGVRSSERQCTQPVPKNRGK
YCVGERKRSQLCNLPACPPDRPSFRHTQCSQFDGMLYKGKLHKWVPVPNDDNPCELHCRPSNSSNTEKLR
DAVVDGTPCYQSRISRDICLNGICKNVGCDFVIDSGAEEDRCGVCRGDGSTCQTVSRTFKETEGQGYVDI
GLIPAGAREILIEEVAEAANFLALRSEDPDKYFLNGGWTIQWNGDYRVAGTTFTYARKGNWENLTSPGPT
SEPVWIQLLFQEKNPGVHYQYTIQRDSHDQVRPPEFSWHYGPWSKCTVTCGTGVQRQSLYCMERQAGVVA
EEYCNTLNRPDERQRKCSEEPCPPRWWAGEWQPCSRSCGPEGLSRRAVFCIRSMGLDEQRALELSACEHL
PRPLAETPCNRHVICPSTWGVGNWSQCSVTCGAGIRQRSVLCINNTDVPCDEAERPITETFCFLQPCQYP
MYIVDTGASGSGSSSPELFNEVDFIPNQLAPRPSPASSPKPVSISNAIDEEELDPPGPVFVDDFYYDYNF
INFHEDLSYGSFEEPHPDLVDNGGWTAPPHIRPTESPSDTPVPTAGALGAEAEDIQGSWSPSPLLSEASY
SPPGLEQTSINPLANFLTEEDTPMGAPELGFPSLPWPPASVDDMMTPVGPGNPDELLVKEDEQSPPSTPW
SDRNKLSTDGNPLGHTSPALPQSPIPTQPSPPSISPTQASPSPDVVEVSTGWNAAWDPVLEADLKPGHGE
LPSTVEVASPPLLPMATVPGIWGRDSPLEPGTPTFSSPELSSQHLKTLTMPGTLLLTVPTDLRSPGPSGQ
PQTPNLEGTQSPGLLPTPARETQTNSSKDPEVQPLQPSLEEDGDPADPLPARNASWQVGNWSQCSTTCGL
GAIWRLVSCSSGNDEDCTLASRPQPARHCHLRPCAAWRTGNWSKCSRNCGGGSSTRDVQCVDTRDLRPLR
PFHCQPGPTKPPNRQLCGTQPCLPWYTSSWRECSEACGGGEQQRLVTCPEPGLCEESLRPNNSRPCNTHP
CTQWVVGPWGQCSAPCGGGVQRRLVRCVNTQTGLAEEDSDLCSHEAWPESSRPCATEDCELVEPPRCERD
RLSFNFCETLRLLGRCQLPTIRAQCCRSCPPLSRGVPSRGHQRVARR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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