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Report for CCDS85422.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
85422.1 Public Mus musculus 7 Bcl7c 23 108 98 CCDS HistoryNCBI Gene:12055Re-query CCDS DB by CCDS ID:85422.1Re-query CCDS DB by GeneID:12055See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 85422.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000205977.1 ENSMUSP00000145743.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000205977.1Link to Ensembl Protein Viewer:ENSMUSP00000145743.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000205977Re-query CCDS DB by Protein ID:ENSMUSP00000145743
Original member Current member NCBI NM_001347652.1 NP_001334581.1 Accepted alive Link to Nucleotide Sequence:NM_001347652.1Link to Protein Sequence:NP_001334581.1Re-query CCDS DB by Nucleotide ID:NM_001347652Re-query CCDS DB by Protein ID:NP_001334581Link to BLAST:NP_001334581.1

Chromosomal Locations for CCDS 85422.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 127666849 127667046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127705727 127705812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127707176 127707337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127707433 127707541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127707880 127707958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127708436 127708527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (726 nt):
ATGGCCGGCCGGACCGTGCGGGCCGAGACCCGGAGCCGGGCCAAAGATGACATCAAGAAGGTGATGGCGA
CCATCGAGAAGGTCCGGAGATGGGAGAAGCGCTGGGTGACTGTGGGAGACACTTCCCTTCGAATCTTCAA
GTGGGTGCCTGTGGTGGATCCCCAGGAGGAGGAGAGGCGGCGGGCAGGAGGCGGGGCAGAGAGATCCCGT
GGCCGGGAGAGACGTGGTAGGGGCACCAGTCCCAGAGGGGGAGGCCCCCTCATCCTACTGGATCTCAATG
ATGAGAACAGCAACCAGAGTTTCCATTCTGAAGGTTCATTGCAAAAGGGTGCTGAGCCCAGCCCTGGGGG
GACGCCCCAGCCCAGCCGCCCTGGATCACCAACTGGACCCCCAGAAGTGATTACTGAAGATACTCAGCCC
CCACAATTGGGTCAGGAGAGAGATCCAGGGGGGACACCTGCAGGCGGTACTGATGAACCCCCAAAGCTGA
CCAAGGAGGAGCCTGTTCCAGAATTGCTAGAAGCTGAGGATTCCGGCGTGAGACTCACCAGGAGAGCCCT
TCAAGAGAAAGGCCTGAAAACCGAGCCCCTCAGGAGGCTTCTCCCCAGGAGAGGCCTCCGGACAAATTCT
CGGCCAACTTCCACGGTTCCGGAACCCAGAGCTCCCGGAAGTGGGAGCAAGGCCCAGAGGGCACCCAGGA
CGATACCACAAGGGAAGGGGAGGTGA

Translation (241 aa):
MAGRTVRAETRSRAKDDIKKVMATIEKVRRWEKRWVTVGDTSLRIFKWVPVVDPQEEERRRAGGGAERSR
GRERRGRGTSPRGGGPLILLDLNDENSNQSFHSEGSLQKGAEPSPGGTPQPSRPGSPTGPPEVITEDTQP
PQLGQERDPGGTPAGGTDEPPKLTKEEPVPELLEAEDSGVRLTRRALQEKGLKTEPLRRLLPRRGLRTNS
RPTSTVPEPRAPGSGSKAQRAPRTIPQGKGR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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