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Report for CCDS84463.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84463.1 Public Mus musculus 19 Zfp950 23 108 98 CCDS HistoryNCBI Gene:414758Re-query CCDS DB by CCDS ID:84463.1Re-query CCDS DB by GeneID:414758See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 84463.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000180544.2 ENSMUSP00000146243.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000180544.2Link to Ensembl Protein Viewer:ENSMUSP00000146243.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000180544Re-query CCDS DB by Protein ID:ENSMUSP00000146243
Original member NCBI NM_001309216.1 NP_001296145.1 Updated not alive Link to Nucleotide Sequence:NM_001309216.1Link to Protein Sequence:NP_001296145.1Re-query CCDS DB by Nucleotide ID:NM_001309216Re-query CCDS DB by Protein ID:NP_001296145
Current member NCBI NM_001309216.2 NP_001296145.1 Accepted alive Link to Nucleotide Sequence:NM_001309216.2Link to Protein Sequence:NP_001296145.1Re-query CCDS DB by Nucleotide ID:NM_001309216Re-query CCDS DB by Protein ID:NP_001296145Link to BLAST:NP_001296145.1

Chromosomal Locations for CCDS 84463.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 61118814 61120452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 61127007 61127067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 61127438 61127564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 61140705 61140707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1830 nt):
ATGGATGCAGTGACCTACGATGAAGTGCATGTGAACTTCACTCAGGAAGAGTGGGCTTTGCTGGATCATT
CCCAGAAAAGTCTCTACAGAGATGTGATGCTGGAGACTTACAAGAACCTGACTGCTATAGGCTACAACTG
GGACGACCATAATATTGAAGAACATTGTCAAAGTTCCAGAAGACATGGAAGGCATGAAACAAGTCATCCT
GGAGAGAAACCCTCTCAATATACTCATTGTGGTAAAGCTTTTGTGTATTGGAGTCATCCCCAAAGGCATG
AAAGAATTCATACTGGAGAGAAACCCTATGGATGTAACCATTGTGGTAAAGCCTTTGCACATCACAGTAA
TCTTCAAAGGCATGAAAGAATTCATACAGGAGAGAAACCCTATGAATGTAATCAATGTGGTAAAGCTTTT
GTAACTCACAGTGACCTCCAAATACATAAAAGAACACATACTGGAGAGAAACCTTATGAGTGTAATCAAT
GTGGTAAAGCCTTTGCATATCACAGTAATCTTCAAAGGCATGAAAGAATTCATACAGGAGAGAAACCTTA
TGAGTGTAATCAATGTGGTAAAGCCTTTGCATATCACAGTAATCTTCAAAGGCATGAAAGAATTCATACA
GGAGAGAAACCTTATGAATGTAATAAATGTGGTAAAGCCTTTGCATGGCACAGTCATCTTCAAAGGCATG
AGATAACTCATACAGGAGAGAAACCTTATGAGTGTAATCAATGTGGTAAAGCCTTTGCACATGATAGTAA
TCTCCACATACATAAAAGAAAGCATGCTGGAGAGAAACCTTATGAATGTAATCAATGTGGTAAAGCCTTT
CCATGTTACAATCTTCTTCAAATACATAAAAGAACACATACTGGAGAGAAACCCTATGAGTGTAATCAAT
GTGGTAAAACCTTTGCATATCACAGTTATCTTCAAATGCATGAAAGAATTCATACAGGAGAAAAACCTTA
TGAATGTAACCATTGTGGTAAAGCCTTTTCACAGCACAGTAGTCTCCGCGTACATAAAAGAACACATACT
GGAGAGAAACCTTATGAATGTAACCAATGTGGTGAAGCCTTTGTATATCACAGTCATCTTCAAATACATA
AAACAATGCATACTGGAGAGAAACCCTTTCAATGTAACCAATGTGATAAAGCCTTTGTTTATAACAATCA
TCTCTTAGTACATAAAAGAATACATACTGGAGAGAAACCCTATGAATGTAACCATTGTGGTAAAGCCTTT
TCACAACTCAGTGGTCTCCATGTACATAAAAGAACCCATACAGGAGAGAAACCCTATAAATGTAATGAAT
GTGGTAAAGCCTTTGCACGTAACAGTCATCTTCAAAGGCATAAAAGAATTCATACAGGAGAGAAACCTCA
TGAATGTAATCAATGTGGTAAAGCCTTTGCACGTCACAGTACTCTACAAGTACATAAAAGAAAACATGCT
GGAGAGAAACCTTATGAATGTAATCAATGTGGTAAAGCCTTTCCTTCTCATAACCTTCTTCATATACATA
AAAGAACGCATACTGGAGAGAAACCCTATGAGTGTAATCAATGTGGTAAAACCTTTGCATATCACAGTCA
TCTTCAAGTGCATGGAAGAATTCATACAGGAGAGAAACCTTATAAATGTAATCAATGTGGTAAAGCCTTT
GCATGTCACAGAAATCTCCGAGTACATAAAAGAAAACATACTGGAGAGAAACCCTATGAATTTAACCATT
ATAGTAAAGCCTTTTCACAACACAGTAGTCTTCAAGTACATAAAAGAACACATATTGGAGAGAAATCCTA
TGAATTATAA

Translation (609 aa):
MDAVTYDEVHVNFTQEEWALLDHSQKSLYRDVMLETYKNLTAIGYNWDDHNIEEHCQSSRRHGRHETSHP
GEKPSQYTHCGKAFVYWSHPQRHERIHTGEKPYGCNHCGKAFAHHSNLQRHERIHTGEKPYECNQCGKAF
VTHSDLQIHKRTHTGEKPYECNQCGKAFAYHSNLQRHERIHTGEKPYECNQCGKAFAYHSNLQRHERIHT
GEKPYECNKCGKAFAWHSHLQRHEITHTGEKPYECNQCGKAFAHDSNLHIHKRKHAGEKPYECNQCGKAF
PCYNLLQIHKRTHTGEKPYECNQCGKTFAYHSYLQMHERIHTGEKPYECNHCGKAFSQHSSLRVHKRTHT
GEKPYECNQCGEAFVYHSHLQIHKTMHTGEKPFQCNQCDKAFVYNNHLLVHKRIHTGEKPYECNHCGKAF
SQLSGLHVHKRTHTGEKPYKCNECGKAFARNSHLQRHKRIHTGEKPHECNQCGKAFARHSTLQVHKRKHA
GEKPYECNQCGKAFPSHNLLHIHKRTHTGEKPYECNQCGKTFAYHSHLQVHGRIHTGEKPYKCNQCGKAF
ACHRNLRVHKRKHTGEKPYEFNHYSKAFSQHSSLQVHKRTHIGEKSYEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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