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Report for CCDS84363.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84363.1 Public Mus musculus 18 Nol4 23 108 98 CCDS HistoryNCBI Gene:319211Re-query CCDS DB by CCDS ID:84363.1Re-query CCDS DB by GeneID:319211See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 84363.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000164186.7 ENSMUSP00000130950.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000164186.7Link to Ensembl Protein Viewer:ENSMUSP00000130950.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000164186Re-query CCDS DB by Protein ID:ENSMUSP00000130950
Original member Current member NCBI NM_001347509.1 NP_001334438.1 Accepted alive Link to Nucleotide Sequence:NM_001347509.1Link to Protein Sequence:NP_001334438.1Re-query CCDS DB by Nucleotide ID:NM_001347509Re-query CCDS DB by Protein ID:NP_001334438Link to BLAST:NP_001334438.1

Chromosomal Locations for CCDS 84363.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 18 (NC_000084.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 22694941 22695134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 22718979 22719156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 22751927 22752040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 22769744 22769935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 22770681 22770860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 22823287 22823570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 22912582 22912714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 22920815 22920927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 22921846 22921957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 22952161 22952310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23039779 23040042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1914 nt):
ATGGAGAGCGAGCGCGACATGTACCGCCAGTTCCAGGACTGGTGCCTTAGGACTTACGGGGACTCAGGCA
AGACCAAGACGGTGACCCGTAAGAAATATGAGCGGATTGTTCAGCTTCTCAACGGCTCAGAGTCAAGCTC
CACCGACAATGCCAAATTTAAATTCTGGGTCAAATCGAAGGGTTTCCAGCTGGGCCAGCCTGATGAGGTC
CGTGGGGGAGGCGGCGGCGCCAAGCAAGTGCTCTTCGTGCGGGTCAAGACCACGGATGGCGTAGGAGTTG
ATGAGAAGCTGTCTTTACGGCGAGTGGCTGTGGTTGAAGATTTCTTTGACATCATCTATTCCATGCATGT
GGAGACAGGGCCGAATGGAGAGCAAATCCGGAAACACGCTGGGCAGAAGAGAACTTACAAAGCAATTTCA
GAGAGCTATGCCTTCCTACCAAGAGAAGCGGTGACACGGTTTCTAATGAGCTGTTCCGAGTGCCAGAAAA
GAATGCACTTGAACCCAGATGGAACGGATCACAAAGATAATGGAAAGCCTCCTACACTGGTGACCAGCAT
GATCGACTACAACATGCCAATCACAATGGCGTACATGAAGCACATGAAACTGCAGCTTCTGAACTCACAG
CAAGATGAGGATGAAAGCTCAATAGAAAGTGACGAATTTGACATGAGTGATTCAACACGAATGTCAGCCG
TGAACTCTGACCTTAGCTCCAACCTGGAAGAAAGAATGCAAAGTCCCCAGACTGTCCATGGCCAGCAAGA
TGATGACTCTGCTGCAGAGAGCTCTAATGGCAATGAGACTCTGGGGCACAGCTCAGCTGCTTCAGGGGGA
GCACATGGCAGGGAGCCCGAGGACTCCAGCAGTGATGGCAAAACCGGGCTGGAGCAGGAAGAGCAGCCAC
TGAACCTGAGTGACAGCCCCAGCTCTGCACAGCTCACTTCAGAGTTCAGGATAGATGACCAAGGCAGTGA
TGGGAAAAACAAGTATAAGAATCTTCTAATCTCTGACCTCAAGATGGAACGAGAAGCGAGAGAAAATGGA
AGCAAGTCTCCAGCACACAGCTACTCCAGCTATGACTCTGGCAAAAATGAGAGTGTTGATCGAGGTGCAG
AGGATCTGTCACTCAACAGGGGAGATGAAGATGAAGATGAACATGATGAGCATGAGGATTCGGAGAAGGT
GAACGAGACAGATGGTGTGGAAGCTGAGAGGCTGAAAGCTTTCAATATGTTTGTCAGGCTGTTTGTAGAT
GAAAACTTGGACCGAATGGTCCCAATCTCTAAGCAGCCCAAAGAAAAGATCCAGGCTATCATTGACTCAT
GCAGGCGACAATTCCCTGAGTATCAAGAGCGTGCCAGAAAACGTATCCGTACTTACCTCAAGTCCTGCAG
GCGGATGAAAAGAAGTGGTTTTGAGATGTCTCGACCTATTCCCTCCCACCTTACTTCAGCAGTTGCAGAG
AGTATCTTGGCTTCAGCCTGTGAAAGCGAGAGTAGAAATGCTGCCAAGAGGATGCGTCTGGATAAAGCAC
AGGATGAAGCTGCTCCTGCTGACAAACAGTGCAAGCCGGAGGCAGCCCAGGCCACCTACTCAACAGCTAC
TGTTCCAGGCTCCCAGGAGGTATTGTACATCAATGGCAATGGGACCTACAGTTACCATAGTTACCGAGGG
CTAGGAGGGCTGCTAAGCCTGGATGACACTTCTAGTAGCGGACCCACAGATCTGAGCATGAAGAGGCAGC
TGGCAACTGGCTCGGGATCGTCCAGCAGCTCAACCTCCAGACCTCAGCTCAGTCCGACGGAAATCAATGC
CGTGAGACAGCTTGTCGCCGGTTATCGAGAATCGGCTGCATTTTTATTGCGTTCCGCAGATGAACTGGAA
AATCTCATTTTACAACAGAACTGA

Translation (637 aa):
MESERDMYRQFQDWCLRTYGDSGKTKTVTRKKYERIVQLLNGSESSSTDNAKFKFWVKSKGFQLGQPDEV
RGGGGGAKQVLFVRVKTTDGVGVDEKLSLRRVAVVEDFFDIIYSMHVETGPNGEQIRKHAGQKRTYKAIS
ESYAFLPREAVTRFLMSCSECQKRMHLNPDGTDHKDNGKPPTLVTSMIDYNMPITMAYMKHMKLQLLNSQ
QDEDESSIESDEFDMSDSTRMSAVNSDLSSNLEERMQSPQTVHGQQDDDSAAESSNGNETLGHSSAASGG
AHGREPEDSSSDGKTGLEQEEQPLNLSDSPSSAQLTSEFRIDDQGSDGKNKYKNLLISDLKMEREARENG
SKSPAHSYSSYDSGKNESVDRGAEDLSLNRGDEDEDEHDEHEDSEKVNETDGVEAERLKAFNMFVRLFVD
ENLDRMVPISKQPKEKIQAIIDSCRRQFPEYQERARKRIRTYLKSCRRMKRSGFEMSRPIPSHLTSAVAE
SILASACESESRNAAKRMRLDKAQDEAAPADKQCKPEAAQATYSTATVPGSQEVLYINGNGTYSYHSYRG
LGGLLSLDDTSSSGPTDLSMKRQLATGSGSSSSSTSRPQLSPTEINAVRQLVAGYRESAAFLLRSADELE
NLILQQN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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