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Report for CCDS84247.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84247.1 Under review, withdrawal Mus musculus 16 Or5ac25 23 108 98 CCDS HistoryNCBI Gene:404311Re-query CCDS DB by CCDS ID:84247.1Re-query CCDS DB by GeneID:404311See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 84247.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000208246.1 ENSMUSP00000146910.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000208246.1Link to Ensembl Protein Viewer:ENSMUSP00000146910.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000208246Re-query CCDS DB by Protein ID:ENSMUSP00000146910
Original member Current member EBI ENSMUST00000213779.1 ENSMUSP00000151413.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000213779.1Link to Ensembl Protein Viewer:ENSMUSP00000151413.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000213779Re-query CCDS DB by Protein ID:ENSMUSP00000151413

Chromosomal Locations for CCDS 84247.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 59361316 59361347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 59361937 59362216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (312 nt):
ATGGAGCTGAACAGGACCCAGCTGACTGAATTTGTTCTCAGAGGAATAACAGATCGTTCAGAGCTGCAAG
TCCCCCTGTTCCTGGTGTTCTTTCTCATCTATGTTATCACCATGGTGGGCAACCTTGGCTTAATCTTTCT
CATCTGGAAGGACCCTCATCTTCACACACCCATGTACCTTTTCCTTGGAAATTTGGCTTTTGCTGATGCC
TGTACTTCATCCTCTGTGACACCAAAGATGCTTATGAAATTTTCAAATAAGAATGACATGATATCCATGG
CCTCAGAAATAAAGAAGTCATCGGTGCCTTGA

Translation (103 aa):
MELNRTQLTEFVLRGITDRSELQVPLFLVFFLIYVITMVGNLGLIFLIWKDPHLHTPMYLFLGNLAFADA
CTSSSVTPKMLMKFSNKNDMISMASEIKKSSVP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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