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Report for CCDS83924.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83924.1 Public Mus musculus 11 Cd300lb 23 108 98 CCDS HistoryNCBI Gene:217304Re-query CCDS DB by CCDS ID:83924.1Re-query CCDS DB by GeneID:217304See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83924.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000149663.3 ENSMUSP00000144728.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000149663.3Link to Ensembl Protein Viewer:ENSMUSP00000144728.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000149663Re-query CCDS DB by Protein ID:ENSMUSP00000144728
Original member Current member NCBI NM_001347651.2 NP_001334580.1 Accepted alive Link to Nucleotide Sequence:NM_001347651.2Link to Protein Sequence:NP_001334580.1Re-query CCDS DB by Nucleotide ID:NM_001347651Re-query CCDS DB by Protein ID:NP_001334580Link to BLAST:NP_001334580.1

Chromosomal Locations for CCDS 83924.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 114924893 114925061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 114926024 114926114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 114928294 114928393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (360 nt):
ATGGAGATGCTCAGGCAAAATGACACGGACACTTACTGGTGTGGTATTGAAAAGTTCGGAACTGACCGTG
GGACCAGAGTTAAAGTGAACGTCTACTCGGTGGGTAAAGATACCATGTCGACTTCTAATCAACTTCCCTG
GCCCACTGTGGACGGCAGTACAGACATGGTGTCTTCTGACTTGCAGAAGAGGACCTATTACATGCTCCTG
GTATTTGTGAAGGTGCCTGCCTTGCTCATCTTGGTTGGTGCTGTCCTCTGGCTGAAGAGGTCAACTCAGA
AGGTCCCTGAGGAACAGTGGAGACACACTCTCTGTAGCGATTTGGACTCTGAACTTCTAGCTAAAGACAT
TTCTCCTTAG

Translation (119 aa):
MEMLRQNDTDTYWCGIEKFGTDRGTRVKVNVYSVGKDTMSTSNQLPWPTVDGSTDMVSSDLQKRTYYMLL
VFVKVPALLILVGAVLWLKRSTQKVPEEQWRHTLCSDLDSELLAKDISP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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