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Report for CCDS83681.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83681.1 Public Mus musculus 10 Pex3 23 108 98 CCDS HistoryNCBI Gene:56535Re-query CCDS DB by CCDS ID:83681.1Re-query CCDS DB by GeneID:56535See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83681.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000105539.1 ENSMUSP00000101178.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000105539.1Link to Ensembl Protein Viewer:ENSMUSP00000101178.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000105539Re-query CCDS DB by Protein ID:ENSMUSP00000101178
Original member Current member NCBI NM_001347361.1 NP_001334290.1 Accepted alive Link to Nucleotide Sequence:NM_001347361.1Link to Protein Sequence:NP_001334290.1Re-query CCDS DB by Nucleotide ID:NM_001347361Re-query CCDS DB by Protein ID:NP_001334290Link to BLAST:NP_001334290.1

Chromosomal Locations for CCDS 83681.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 13524885 13524968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13527741 13527837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13531258 13531380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13532340 13532410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13534672 13534837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13535555 13535609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13535709 13535775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13535943 13536067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13537431 13537474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13542624 13542705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 13546350 13546356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (921 nt):
ATGACAGTGCTGTCCATGCTGCCGACACTGAGAGAGGCCTTAATGCAGCAGCTCAACTCGGAGAGTCTCA
CAGCTCTGTTGAAAAGCAGGCCTTCAAACAAGCTGGAAATATGGGAGGACCTAAAGATAATAAGTTTCAC
AAGAAGTATTGTAGCTGTATATAGCACGTGTATGCTGGTGGTTCTTTTGCGAGTCCAGTTAAACATAATT
GGTGGATATATTTACCTGGATAATGCAACAGTTGGCAAAAATGGCACTACCGTTCTTGCTCCTCCGGATG
TACAGCAGCAGTATTTATCAAGTATTCAACACCTCCTTGGAGACGGCCTCACAGAGTTGGTCACTGTCAT
TAAACAAGCTGTACAAAGGATCTTAGGAAGTGTCTCTCTTAAACATTCCTTGTCCCTTTTGGACTTGGAG
CAAAAACTAAAAGAAATCAGAATTCTTGTTGAGCAACATCAGTCTTCTTGGAATGATAAAGATGTGTCCA
GGTCTTCACTGTGCCAGTACATGATGCCAGATGAGGAGACACCATTGGCAGCTCAGGCCTATGGGCTTTC
TCACAGAGATATCACCACTATTAAACTTCTCAATGAGACAAGAGACATGCTGGAAAGTCCAGATTTTAGT
ACAGTTTTGAATACCTGTCTAAACAGAGGCTTCAGTCGGCTTCTAGACAACATGGCCGAATTCTTTCGAC
CCACTGAGCAGGACCTACAGCATGGTAACTCCATAAACAGTCTGTCCAGTGTCAGCCTGCCTTTAGCTAA
GATAATTCCCATAGTGAACGGGCAGATCCATTCAGTTTGCAGTGAGACACCTAGTCATTTTGTGCAGGAT
CTGCTGATGATGGAACAGGTGAAAGACTTTGCTGCTAACGTGTACGAAGCGTTTAGTACCCCCCAACAAC
TGGAGAAATGA

Translation (306 aa):
MTVLSMLPTLREALMQQLNSESLTALLKSRPSNKLEIWEDLKIISFTRSIVAVYSTCMLVVLLRVQLNII
GGYIYLDNATVGKNGTTVLAPPDVQQQYLSSIQHLLGDGLTELVTVIKQAVQRILGSVSLKHSLSLLDLE
QKLKEIRILVEQHQSSWNDKDVSRSSLCQYMMPDEETPLAAQAYGLSHRDITTIKLLNETRDMLESPDFS
TVLNTCLNRGFSRLLDNMAEFFRPTEQDLQHGNSINSLSSVSLPLAKIIPIVNGQIHSVCSETPSHFVQD
LLMMEQVKDFAANVYEAFSTPQQLEK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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