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Report for CCDS8360.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8360.2 Public Homo sapiens 11 TTC12 24 110 108 CCDS HistoryNCBI Gene:54970Re-query CCDS DB by CCDS ID:8360.2Re-query CCDS DB by GeneID:54970See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 8360.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000529221.6 ENSP00000433757.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000529221.6Link to Ensembl Protein Viewer:ENSP00000433757.1Re-query CCDS DB by Nucleotide ID:ENST00000529221Re-query CCDS DB by Protein ID:ENSP00000433757
Original member Current member NCBI NM_001378064.1 NP_001364993.1 Accepted alive Link to Nucleotide Sequence:NM_001378064.1Link to Protein Sequence:NP_001364993.1Re-query CCDS DB by Nucleotide ID:NM_001378064Re-query CCDS DB by Protein ID:NP_001364993Link to BLAST:NP_001364993.1
Original member Current member NCBI NM_001378065.1 NP_001364994.1 Accepted alive Link to Nucleotide Sequence:NM_001378065.1Link to Protein Sequence:NP_001364994.1Re-query CCDS DB by Nucleotide ID:NM_001378065Re-query CCDS DB by Protein ID:NP_001364994Link to BLAST:NP_001364994.1
Original member Current member NCBI NM_017868.4 NP_060338.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017868.4Link to Protein Sequence:NP_060338.3Re-query CCDS DB by Nucleotide ID:NM_017868Re-query CCDS DB by Protein ID:NP_060338Link to BLAST:NP_060338.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001364993.1 705 Q9H892-1 705 100% 0 0
NP_001364994.1 705 Q9H892-1 705 100% 0 0
NP_060338.3 705 Q9H892-1 705 100% 0 0

Chromosomal Locations for CCDS 8360.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 113316258 113316315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 113323288 113323451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 113323994 113324015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 113324605 113324682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 113325524 113325645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 113329920 113329979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 113334966 113335037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 113338774 113338834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 113339286 113339474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 113340664 113340733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 113341837 113341925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 113344272 113344440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 113350073 113350165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 113351239 113351299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 113352070 113352207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 113359363 113359461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 113359940 113360008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 113362401 113362502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 113363828 113363927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 113364835 113365060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 113366225 113366300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2118 nt):
ATGGATGCTGATAAAGAGAAAGATTTGCAGAAATTTCTTAAAAATGTGGATGAAATCTCCAATTTAATTC
AGGAGATGAATTCTGATGACCCAGTTGTGCAACAGAAAGCTGTCCTGGAGACAGAAAAGAGACTACTGCT
TATGGAGGAAGACCAGGAGGAGGATGAATGCAGGACCACCTTGAACAAGACTATGATCAGTCCTCCACAA
ACTGCTATGAAGAGTGCAGAAGAAATAAACTCAGAGGCCTTCTTGGCATCTGTGGAGAAGGATGCAAAGG
AACGAGCCAAGAGAAGAAGGGAAAACAAAGTCTTGGCGGATGCCCTAAAAGAAAAAGGGAATGAAGCATT
TGCTGAAGGCAATTATGAAACAGCTATCCTGCGCTACAGTGAGGGTTTGGAGAAGCTGAAGGACATGAAA
GTGCTGTACACCAACCGAGCCCAGGCTTATATGAAACTTGAGGACTATGAGAAGGCACTGGTGGATTGTG
AGTGGGCTCTCAAGTGTGATGAAAAATGCACAAAAGCATATTTTCACATGGGAAAAGCCAACCTGGCCCT
GAAGAACTACAGTGTGTCTAGAGAGTGTTATAAGAAGATCTTAGAAATAAACCCCAAGCTGCAAACCCAG
GTGAAAGGTTACCTGAATCAAGTAGATCTTCAGGAAAAAGCAGACCTTCAAGAAAAGGAAGCCCACGAAC
TGCTGGATTCAGGAAAGAACACAGCCGTGACCACCAAGAACCTCCTGGAGACCCTTTCCAAGCCTGACCA
GATCCCCTTGTTCTATGCTGGGGGGATTGAGATCCTGACTGAAATGATAAATGAGTGCACAGAACAAACT
TTATTCAGAATGCACAATGGATTTAGTATCATCAGTGACAACGAGGTCATAAGAAGGTGTTTTTCCACAG
CAGGAAATGATGCAGTTGAAGAAATGGTCTGTGTGTCTGTTCTCAAGCTCTGGCAAGCAGTGTGCAGCAG
GAACGAGGAAAACCAGCGTGTGCTAGTGATACACCATGACAGGGCCAGGCTGTTGGCCGCCCTCTTGTCC
TCCAAGGTCCTGGCCATCCGGCAGCAGAGCTTTGCCCTGCTGCTGCATCTCGCCCAGACTGAGAGCGGAC
GGAGCCTGATCATCAACCACCTTGACCTGACCAGATTATTGGAAGCGCTGGTGTCATTTCTTGATTTCTC
GGATAAGGAGGCCAACACTGCTATGGGACTGTTCACAGACTTGGCTCTGGAAGAAAGATTCCAAGTCTGG
TTCCAGGCCAACCTTCCAGGTGTTCTCCCTGCACTCACAGGCGTTCTGAAGACAGATCCCAAGGTAAGCA
GCTCCTCGGCTCTGTGCCAGTGCATTGCCATCATGGGAAACCTCAGTGCTGAGCCCACTACCCGAAGACA
CATGGCGGCCTGTGAGGAATTTGGGGATGGCTGCTTGAGCCTCCTGGCCAGGTGTGAGGAGGATGTGGAC
CTGTTCAGAGAGGTTATCTACACACTCCTGGGACTCATGATGAACCTGTGTCTTCAGGCTCCCTTTGTCT
CTGAGGTTTGGGCTGTGGAGGTGAGCAGAAGGTGCCTGTCTTTACTAAACAGCCAGGATGGAGGAATCCT
GACAAGAGCTGCTGGTGTTCTGAGCCGGACCCTTTCTTCCTCTCTGAAAATTGTTGAGGAGGCCTTGCGA
GCAGGAGTGGTAAAGAAAATGATGAAATTCCTGAAGACAGGAGGTGAGACTGCATCACGTTATGCTATAA
AGATACTAGCTATCTGCACGAATAGTTATCATGAAGCTCGGGAAGAAGTAATAAGACTGGATAAAAAGTT
GAGCGTTATGATGAAGCTGCTCAGCTCGGAGGATGAGGTTCTGGTGGGCAACGCTGCCCTCTGCCTTGGT
AACTGCATGGAGGTGCCCAACGTTGCGTCTTCCCTGCTAAAGACGGACCTTTTGCAGGTCTTGTTAAAGC
TTGCAGGCAGTGACACACAGAAGACGGCCGTGCAGGTGAACGCAGGCATTGCTCTGGGGAAGCTGTGCAC
AGCTGAGCCCAGATTTGCTGCTCAACTGAGAAAGCTTCATGGCCTAGAAATTCTCAACTCTACGATGAAA
TACATCAGTGATTCTTGA

Translation (705 aa):
MDADKEKDLQKFLKNVDEISNLIQEMNSDDPVVQQKAVLETEKRLLLMEEDQEEDECRTTLNKTMISPPQ
TAMKSAEEINSEAFLASVEKDAKERAKRRRENKVLADALKEKGNEAFAEGNYETAILRYSEGLEKLKDMK
VLYTNRAQAYMKLEDYEKALVDCEWALKCDEKCTKAYFHMGKANLALKNYSVSRECYKKILEINPKLQTQ
VKGYLNQVDLQEKADLQEKEAHELLDSGKNTAVTTKNLLETLSKPDQIPLFYAGGIEILTEMINECTEQT
LFRMHNGFSIISDNEVIRRCFSTAGNDAVEEMVCVSVLKLWQAVCSRNEENQRVLVIHHDRARLLAALLS
SKVLAIRQQSFALLLHLAQTESGRSLIINHLDLTRLLEALVSFLDFSDKEANTAMGLFTDLALEERFQVW
FQANLPGVLPALTGVLKTDPKVSSSSALCQCIAIMGNLSAEPTTRRHMAACEEFGDGCLSLLARCEEDVD
LFREVIYTLLGLMMNLCLQAPFVSEVWAVEVSRRCLSLLNSQDGGILTRAAGVLSRTLSSSLKIVEEALR
AGVVKKMMKFLKTGGETASRYAIKILAICTNSYHEAREEVIRLDKKLSVMMKLLSSEDEVLVGNAALCLG
NCMEVPNVASSLLKTDLLQVLLKLAGSDTQKTAVQVNAGIALGKLCTAEPRFAAQLRKLHGLEILNSTMK
YISDS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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