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Report for CCDS83598.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83598.1 Public Mus musculus 1 Camsap2 23 108 98 CCDS HistoryNCBI Gene:67886Re-query CCDS DB by CCDS ID:83598.1Re-query CCDS DB by GeneID:67886See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83598.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000192314.1 ENSMUSP00000142299.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000192314.1Link to Ensembl Protein Viewer:ENSMUSP00000142299.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000192314Re-query CCDS DB by Protein ID:ENSMUSP00000142299
Original member Current member NCBI NM_001347109.1 NP_001334038.1 Accepted alive Link to Nucleotide Sequence:NM_001347109.1Link to Protein Sequence:NP_001334038.1Re-query CCDS DB by Nucleotide ID:NM_001347109Re-query CCDS DB by Protein ID:NP_001334038Link to BLAST:NP_001334038.1

Chromosomal Locations for CCDS 83598.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 136270842 136271147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136271531 136271649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136273750 136273865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136274801 136274873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136276538 136276758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136277194 136277330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136280306 136282499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136282812 136282881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136283867 136283901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136285909 136286002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136287900 136287993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136292880 136293019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136293280 136293421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136297284 136297316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136297742 136297825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136304295 136304456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136324737 136324996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 136345299 136345437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4419 nt):
ATGGGGGATGCTGCAGACCCGCGGGAGATGAGAAGGACGTTCATTGTTCCAGCCATCAAACCCTTTGACC
ACTATGACTTCTCCAGGGCCAAAATCGCCTGCAATCTGGCCTGGCTGGTGGCCAAAGCCTTTGGGACAGA
AAATGTGCCCGAGGAGCTTGGCGACCCATTTTACACAGACCAGTATGACCAGGAGCACATCAAACCCCCT
GTCGTTAACCTGCTTCTGTCGGCCGAGCTGTACTGTCGCGCTGGAAGCCTCATCCTCAAGAGCGATGCTG
CAAAGCCCCTCCTGGGCCATGATGCTGTGATCCAGGCATTAGCACAGAAAGGCCTGTATGTCACTGACCA
GGAGAAACTGGTAACTGAAAGAGATCTCCACAAGAAACCCATACAGATGAGTGCACATTTGGCTATGATT
GATACTCTAATGATGGCTTACACTGTAGAGATGATCAGCATAGAAAAAGTAATTGCATGTGCTCAACAGT
ATTCAGCTTTTTTTCAAGCCACAGATCTGCCCTATGATATTGAGGATGCTGTCATGTACTGGATGAATAA
GGTAAATGAACACTTGAAAGACATAATGGAACAAGAACAAAAATCTAAAGAGCACCACCCAGCTGAAGCT
CCAGGAGGCCAAAAGTCTCCTTCCAAATGGTTTTGGAAACTGGTTCCAGCTCGTTACAGGAAGGAACAAA
CACTGCTTAAGCAACTGCCTTGCATTCCATTGGTGGAAAACTTGTTGAAGGATGGGACCGACGGCTGCGC
ACTAGCTGCCCTCATTCACTTCTACTGCCCTGCTGTTGTCCGGCTAGAGGATATTTGTTTGAAAGAAACT
ATGTCTTTGGCTGACAGTCTGTACAATCTACAGCTGATTCAGGAATTTTGCCAAGAATACTTAAACCATT
GCTGCCATTTCAGCTTGGAAGATATGCTTTATGCTGCTTCATCCATAAAGAGTAATTATTTGGTGTTCAT
GGCAGAACTCTTCTGGTGGTTTGAAGTTGTGAAGCCTTCATTTGTGCAGCCTCGTGTTGTCCGTCCACAA
GGAGCTGAGCCTGCAAAAGACGTGCCATCGGTTCCTGTCTTAAATGCTGCCAAAAGAAACATCCGGGATA
GTTCATCTAGTTCTGACTTCTCCTCCAGATATACACGGCCGCAGACTCATTCTTCAGCCTCAGGAGGAAT
TAGAAGGTCTTCATCTATGTCTTATGTTGATGGCTTCATAGGAACGTGGCCTAAAGAGAAAAGAACATCA
GTGCATGGCGTTTCATTCGACATTTCTTTTGATAAAGAAGACAGTGCGCAGAGCTCCACTCCAAACCGGG
GAATCATCCGCTCTGTTAGCAATGAAGGGCTCACTCTCAACAACAGCCGTGCATCCAAGCACATTAGGAA
AAATCTGTCCTTCAAGCCAGTGAACGGAGAAGAGGAGGAGAGCATTGAGGAAGAGCTTCATGTCGACCCT
CATGGTGACCTCCAATCACCCATGCCTCTCAACACGAATGAACTGAACTCTAATGAGAGTACTCACTACA
AGCTTCCAAATGGGGCTTTACAAAACAGAGTGCTTCTAGACGAGTTCGGGAATCAGATAGAAACGCCAAG
CATTGAAGAAGCGTTACAGATAATCCACGATACTGAAAGACCTCCTCATACGCCACGGCCAGATCAGATC
GCTAATGGCTTCTTTCTTCATGGTCAAGATCTAAGTATCCTGAATTCAAATATCAAGCTAAACCAGTCCA
GTCCTGATAACTTAACTGACACAAAAGGTGCCTTGAGTCCCATAACAGACACTACAGAAGTCGACACTGG
AATTCACGTTCCTTCAGAAGACATTCCGGAGACCATGGACGAAGACTCCTCCTTGAGAGATTATACTGTT
AGCTTAGACTCCGACATGGATGATGCATCTAAGCTTCTTCAGGACTATGACCTAAGAGCCAGCAACCCCA
GGGAAGCCCTGAGTCCTTGCCCAAGCACCATCAGCACCAAGTCTCAGCCCGGGAGCAGTGCCTCGTCTAG
CTCTGGGGTGAAGATGACCAGCTTTGCTGAGCAGAAGTTCAGGAAGCTGAATCACACTGATGGGAAAAGT
AGCGGGAGCAGTTCACAGAAAACCACACCAGAAGGCTCAGAACTGAATATTCCTCACGTGGTGTCTTGGG
CTCAAATTCCAGAGGAAGCGGGTGTTGCCCCAGGTCGGGACACGACACAGCTGTTGGCTTCTGAGATGGT
GCACCTTAGGATGAGGCTGGAGGAAAAGAGACGTGCGATAGAAGCCCAGAAGAAGAAGATGGAAGCCGCT
TTTACCAAACAGAGGCAGAAAATGGGAAGGACAGCGTTCCTGACTGTAGTGAAGAAGAAAGGGGAAGGGA
TTTCCCCTCTCCGAGAGGAAGCAGCAGGTGCAGAAGACGAGAAAGTATATACGGACCGAGCAAAGGAAAG
GGAGTCACAGAAAATGGACGGACAGAGGAGCAAGTCCTTGGCAGACATAAAAGAGAGCATGGAGACCCCT
CCAGGCAGATGGCTGAAGTCGCCAACCACGCCTGTTGATCCTGAGAGGCAGTGGAACCTGACAAGCCCTT
CAGAAGAGACTTTAAATGAAGGAGAAATCTTAGAGTATACAAAGTCGATTGAAAAGCTGAATTCATCCTT
GCACTTTCTACAACAAGAAATGCAGCGCTTGTCCCTTCAGCAGGAGATGTTAATGCAGATGAGAGAGCAG
CAGGCCTGGGTGATTTCACCTCCGCAACCCTCTCCACAGAAGCAGATCCGCGATTTTAAACCTAGACAGG
CAGGCCTGTCATCAGCTGCTGCACCGTTCTCTTCAGACTCCCCACGCCCAACTCACCCATCCCCACAGTC
TTCCACCAGGAAGAGCGCGTCTTTTTCTGTTAAAAATCAAAGGACTCCAAGGCCAAATGAATTAAAAATA
ACTCCTTTGAACCGAACCTTGACACCTCCTCGGTCTGTGGATAGCCTTCCTCGGCTAAGGAGGTTTTCCC
CAAGTCAGGTTCCCATTCAGACACGGTCATTTGTATGCTTTGGTGATGATGGAGAGCCCCAAAAAGAGCC
CAAACAGAAAGAGGAGATTAAAAAGGAGCCCTCAGAGTGCAAAGGGACTTTGGGACCTTGTGACCATAAT
CCTGGGGAGAAGGAGATTAAACCTGTTGAATCAACAGTGTCTGAGGTGTTGTCACAGCCTATCACAGAGA
CTGTGTGTGTGACACCAAATGAGGACCAACTGAGCCAGCCCACAGAGCCACCTCCTAAACCTGTTTTCCC
ACCTACTGCTCCTAAAAATGTCAATCTGATTGAAGTTTCTCTGTCCGATTTAAAACCCCCTGAAAAGGCT
GATGTATCTGTTGAGAAGTTGGATGGAGAGAGTGATAAGGAACAGTTTGACGATGACCAGAAAGTATGCT
GTGGCTTCTTCTTTAAGGATGATCAAAAGGCAGAGAATGATATGGCAATGAAGCGAGCAGCTTTGCTGGA
GAAACGGCTAAGAAGAGAGAAAGAGACTCAGCTTCGGAAGCAGCAACTGGAAGCGGAGATGGAGCATAAG
AAAGAGGAGACGAGACGAAAAACTGAAGAAGAACGTCAGAAGAAGGAAGACGAGCGAGCACGGAGAGAGT
TTATCAGGCAGGAATACATGAGGAGGAAACAGCTGAAACTGATGGAAGACATGGATACAGTAATCAAGCC
TCGACCTCAGGCGGCTAAACAGAAAAAACAGCGGCCAAAATCCATTCACAGAGATCATATTGAATCTCCC
AAAACACCGATCAAAGGCCCTCCAGTCTCTAGCCTCTCATTGGCATCGCTGAACACAGGTGATAGCGAGA
GTGTTCATTCGGGCAAGAGGACGCCAAGGTCGGAGTCTGTAGAAGGCTTCTTATCTCCAAGTCGTTGTGG
CAGTCGGAATGGCGAGAAAGACTGGGAAAACGCATCCACAACTTCTTCGGTGGCTTCTGGAACAGAGTAC
ACAGGACCAAAGCTTTACAAGGAACCTAGTGCAAAATCCAATAAACACATAATACAGAATGCTTTAGCTC
ATTGCTGTCTGGCTGGAAAAGTAAATGAAGGTCAGAAGAAAAAAATCCTAGAGGAAATGGAGAAGTCAGA
TGCCAACAACTTCTTAATCTTGTTCCGGGATTCAGGCTGCCAGTTCAGGTCTTTGTATACTTACTGCCCA
GAAACTGAAGAAATCAATAAACTGACTGGGATAGGTCCTAAATCTATCACTAAAAAGATGATTGAGGGAC
TTTACAAGTACAATTCTGACAGAAAACAGTTTAGCCACATACCTGCTAAAACTTTATCTGCTAGCGTGGA
TGCGATTACCATTCATAGCCACTTATGGCAGACCAAGAGACCAGTAACCCCAAAAAAACTCTTACCCACT
AAAGCATAG

Translation (1472 aa):
MGDAADPREMRRTFIVPAIKPFDHYDFSRAKIACNLAWLVAKAFGTENVPEELGDPFYTDQYDQEHIKPP
VVNLLLSAELYCRAGSLILKSDAAKPLLGHDAVIQALAQKGLYVTDQEKLVTERDLHKKPIQMSAHLAMI
DTLMMAYTVEMISIEKVIACAQQYSAFFQATDLPYDIEDAVMYWMNKVNEHLKDIMEQEQKSKEHHPAEA
PGGQKSPSKWFWKLVPARYRKEQTLLKQLPCIPLVENLLKDGTDGCALAALIHFYCPAVVRLEDICLKET
MSLADSLYNLQLIQEFCQEYLNHCCHFSLEDMLYAASSIKSNYLVFMAELFWWFEVVKPSFVQPRVVRPQ
GAEPAKDVPSVPVLNAAKRNIRDSSSSSDFSSRYTRPQTHSSASGGIRRSSSMSYVDGFIGTWPKEKRTS
VHGVSFDISFDKEDSAQSSTPNRGIIRSVSNEGLTLNNSRASKHIRKNLSFKPVNGEEEESIEEELHVDP
HGDLQSPMPLNTNELNSNESTHYKLPNGALQNRVLLDEFGNQIETPSIEEALQIIHDTERPPHTPRPDQI
ANGFFLHGQDLSILNSNIKLNQSSPDNLTDTKGALSPITDTTEVDTGIHVPSEDIPETMDEDSSLRDYTV
SLDSDMDDASKLLQDYDLRASNPREALSPCPSTISTKSQPGSSASSSSGVKMTSFAEQKFRKLNHTDGKS
SGSSSQKTTPEGSELNIPHVVSWAQIPEEAGVAPGRDTTQLLASEMVHLRMRLEEKRRAIEAQKKKMEAA
FTKQRQKMGRTAFLTVVKKKGEGISPLREEAAGAEDEKVYTDRAKERESQKMDGQRSKSLADIKESMETP
PGRWLKSPTTPVDPERQWNLTSPSEETLNEGEILEYTKSIEKLNSSLHFLQQEMQRLSLQQEMLMQMREQ
QAWVISPPQPSPQKQIRDFKPRQAGLSSAAAPFSSDSPRPTHPSPQSSTRKSASFSVKNQRTPRPNELKI
TPLNRTLTPPRSVDSLPRLRRFSPSQVPIQTRSFVCFGDDGEPQKEPKQKEEIKKEPSECKGTLGPCDHN
PGEKEIKPVESTVSEVLSQPITETVCVTPNEDQLSQPTEPPPKPVFPPTAPKNVNLIEVSLSDLKPPEKA
DVSVEKLDGESDKEQFDDDQKVCCGFFFKDDQKAENDMAMKRAALLEKRLRREKETQLRKQQLEAEMEHK
KEETRRKTEEERQKKEDERARREFIRQEYMRRKQLKLMEDMDTVIKPRPQAAKQKKQRPKSIHRDHIESP
KTPIKGPPVSSLSLASLNTGDSESVHSGKRTPRSESVEGFLSPSRCGSRNGEKDWENASTTSSVASGTEY
TGPKLYKEPSAKSNKHIIQNALAHCCLAGKVNEGQKKKILEEMEKSDANNFLILFRDSGCQFRSLYTYCP
ETEEINKLTGIGPKSITKKMIEGLYKYNSDRKQFSHIPAKTLSASVDAITIHSHLWQTKRPVTPKKLLPT
KA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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