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Report for CCDS83402.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83402.1 Public Homo sapiens 9 ZNF618 24 110 108 CCDS HistoryNCBI Gene:114991Re-query CCDS DB by CCDS ID:83402.1Re-query CCDS DB by GeneID:114991See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83402.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000374126.10 ENSP00000363241.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000374126.10Link to Ensembl Protein Viewer:ENSP00000363241.5Re-query CCDS DB by Nucleotide ID:ENST00000374126Re-query CCDS DB by Protein ID:ENSP00000363241
Original member Current member NCBI NM_001318042.2 NP_001304971.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001318042.2Link to Protein Sequence:NP_001304971.1Re-query CCDS DB by Nucleotide ID:NM_001318042Re-query CCDS DB by Protein ID:NP_001304971Link to BLAST:NP_001304971.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001304971.1 954 Q5T7W0-1 954 100% 0 0

Chromosomal Locations for CCDS 83402.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 113876381 113876413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 113969117 113969160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 113988321 113988580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 113998259 113998354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114001996 114002073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114002624 114002662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114007350 114007439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114008344 114008379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114008477 114008554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114016695 114016784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114028733 114028972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114032645 114032728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114036300 114036377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114047893 114047994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114048651 114050167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2865 nt):
ATGAACCAGCCGGGCGGCGCGGCGGCTCCGCAGGCTGACGGAGCCAGTGCAGCCGGAAGGAAAAGCACTG
CGAGCAGGGAGCGCTTGAAGCGCAGCCAGAAGAGCACCAAGGTGGAGGGCCCAGAGCCAGTGCCAGCCGA
GGCCTCGCTGAGTGCCGAGCAAGGAACGATGACGGAGGTGAAGGTGAAGACAGAGCTGCCCGATGACTAC
ATCCAGGAGGTGATCTGGCAGGGCGAGGCCAAGGAGGAGAAGAAGGCGGTCAGCAAGGATGGGACCAGCG
ACGTGCCTGCCGAGATCTGCGTGGTGATCGGCGGCGTCCGCAACCAGCAGACCCTTGATGGAAAAGCGCC
CGAAGGCAGCCCCCACGGTGGATCTGTGCGAAGCCGGTATTCAGGGACCTGGATTTTTGACCAAGCATTG
AGATATGCATCTGGGTCTTACGAATGCGGAATCTGTGGCAAGAAGTACAAGTATTACAACTGCTTCCAGA
CCCACGTGCGGGCGCACCGAGACACCGAAGCCACCTCAGGGGAGGGAGCCTCCCAAAGCAACAATTTCAG
GTACACATGTGATATCTGCGGGAAGAAGTACAAATACTACAGCTGTTTCCAAGAGCACCGAGACCTGCAC
GCAGTGGATGTGTTTAGTGTGGAAGGGGCCCCTGAGAACCGGGCAGACCCCTTCGACCAAGGTGTCGTGG
CCACGGACGAGGTGAAGGAGGAGCCCCCGGAGCCATTCCAGAAAATCGGGCCAAAAACTGGCAATTACAC
CTGTGAATTCTGCGGCAAACAGTACAAGTACTACACTCCCTACCAGGAGCATGTGGCCTTACACGCCCCC
ATCAGTACTGCCCCCGGGTGGGAGCCACCGGATGATCCAGACACGGGCTCTGAGTGTTCACATCCAGAGG
TCTCCCCATCTCCACGCTTCGTGGCAGCGAAGACCCAGACGAACCAGTCGGGGAAAAAAGCTCCGGCCTC
CGTGGTCCGATGTGCCACCCTCTTACACCGCACCCCTCCAGCCACCCAAACCCAGACGTTCCGCACTCCA
AATTCGGGATCTCCGGCGAGCAAGGCAACCGCAGCAGAAAGCGCTTTCAGTCGGAGAGTAGAAGGCAAAG
CACAAAACCACTTTGAAGAGACGAACAGCAGTTCGCAGAACTCCAGCGAACCCTACACCTGCGGCGCCTG
TGGGATCCAGTTCCAGTTCTACAACAACCTGTTGGAGCACATGCAGTCCCATGCAGCTGACAATGAAAAC
AACATTGCCTCCAACCAGTCCCGATCGCCACCTGCTGTTGTAGAAGAGAAGTGGAAACCTCAGGCCCAGA
GGAACAGTGCCAATAACACCACTACCAGTGGTTTAACACCCAACAGCATGATCCCCGAAAAGGAGCGGCA
GAACATCGCAGAGCGGCTGTTGAGGGTCATGTGTGCCGACCTGGGTGCACTGAGCGTGGTCAGCGGGAAG
GAGTTCCTGAAGTTGGCCCAGACCTTAGTAGACAGTGGTGCCCGCTATGGGGCCTTCTCGGTCACTGAAA
TCCTGGGCAACTTCAACACGCTGGCGCTGAAGCACCTGCCACGCATGTACAACCAGGTGAAGGTGAAAGT
GACCTGTGCCTTGGGCAGCAATGCCTGCCTAGGCATCGGTGTCACCTGCCACTCCCAGAGTGTTGGCCCT
GACTCCTGCTACATCCTCACAGCCTACCAGGCCGAGGGCAACCACATCAAGAGCTATGTGCTTGGTGTGA
AGGGTGCGGACATTCGCGACAGCGGTGACCTTGTGCACCACTGGGTGCAGAACGTGCTGTCGGAGTTCGT
GATGTCGGAGATCAGGACAGTGTACGTGACGGATTGCCGGGTGAGCACGTCCGCCTTCTCCAAGGCCGGC
ATGTGCCTTCGCTGCTCAGCCTGTGCCTTGAACTCGGTGGTGCAGAGCGTGCTGAGCAAGCGGACACTGC
AGGCCCGCAGCATGCACGAGGTCATCGAGCTGCTCAACGTGTGCGAGGACCTGGCGGGCTCCACGGGCCT
GGCCAAGGAGACCTTCGGGTCGCTGGAGGAGACGTCTCCACCACCCTGCTGGAACTCGGTGACGGACTCA
CTGTTGCTGGTGCATGAGCGCTATGAGCAGATCTGCGAGTTCTACAGCCGGGCCAAGAAGATGAACCTCA
TCCAGAGCCTCAACAAGCACCTGCTCAGCAACCTGGCGGCCATCCTGACGCCGGTGAAGCAGGCAGTCAT
CGAGCTGAGCAACGAGAGCCAGCCCACCCTGCAGCTGGTGCTGCCCACCTACGTCAGGCTGGAGAAGCTG
TTCACGGCCAAGGCCAACGACGCAGGCACTGTCAGCAAGCTCTGCCACCTCTTCCTGGAGGCGCTCAAGG
AGAACTTCAAGGTGCACCCGGCCCACAAGGTGGCCATGATCCTGGACCCGCAGCAGAAGCTGCGGCCTGT
GCCACCCTACCAGCACGAGGAGATCATCGGCAAGGTCTGTGAGCTCATCAACGAGGTGAAGGAGTCCTGG
GCCGAGGAGGCCGACTTCGAGCCCGCTGCCAAGAAGCCCCGCTCTGCTGCCGTCGAGAACCCCGCAGCTC
AGGAAGATGATCGGCTAGGCAAAAATGAAGTGTACGATTACCTGCAGGAGCCCCTCTTCCAGGCTACCCC
TGATCTCTTCCAGTACTGGTCGTGCGTTACCCAAAAGCACACAAAACTCGCCAAGCTCGCCTTCTGGCTC
CTGGCGGTTCCGGCCGTGGGCGCCAGAAGCGGGTGTGTAAATATGTGTGAACAAGCGCTTCTAATCAAAC
GGAGGCGGCTGCTCAGTCCAGAAGATATGAATAAACTCATGTTTCTGAAATCCAACATGCTTTAA

Translation (954 aa):
MNQPGGAAAPQADGASAAGRKSTASRERLKRSQKSTKVEGPEPVPAEASLSAEQGTMTEVKVKTELPDDY
IQEVIWQGEAKEEKKAVSKDGTSDVPAEICVVIGGVRNQQTLDGKAPEGSPHGGSVRSRYSGTWIFDQAL
RYASGSYECGICGKKYKYYNCFQTHVRAHRDTEATSGEGASQSNNFRYTCDICGKKYKYYSCFQEHRDLH
AVDVFSVEGAPENRADPFDQGVVATDEVKEEPPEPFQKIGPKTGNYTCEFCGKQYKYYTPYQEHVALHAP
ISTAPGWEPPDDPDTGSECSHPEVSPSPRFVAAKTQTNQSGKKAPASVVRCATLLHRTPPATQTQTFRTP
NSGSPASKATAAESAFSRRVEGKAQNHFEETNSSSQNSSEPYTCGACGIQFQFYNNLLEHMQSHAADNEN
NIASNQSRSPPAVVEEKWKPQAQRNSANNTTTSGLTPNSMIPEKERQNIAERLLRVMCADLGALSVVSGK
EFLKLAQTLVDSGARYGAFSVTEILGNFNTLALKHLPRMYNQVKVKVTCALGSNACLGIGVTCHSQSVGP
DSCYILTAYQAEGNHIKSYVLGVKGADIRDSGDLVHHWVQNVLSEFVMSEIRTVYVTDCRVSTSAFSKAG
MCLRCSACALNSVVQSVLSKRTLQARSMHEVIELLNVCEDLAGSTGLAKETFGSLEETSPPPCWNSVTDS
LLLVHERYEQICEFYSRAKKMNLIQSLNKHLLSNLAAILTPVKQAVIELSNESQPTLQLVLPTYVRLEKL
FTAKANDAGTVSKLCHLFLEALKENFKVHPAHKVAMILDPQQKLRPVPPYQHEEIIGKVCELINEVKESW
AEEADFEPAAKKPRSAAVENPAAQEDDRLGKNEVYDYLQEPLFQATPDLFQYWSCVTQKHTKLAKLAFWL
LAVPAVGARSGCVNMCEQALLIKRRRLLSPEDMNKLMFLKSNML


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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