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Report for CCDS82285.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82285.1 Public Homo sapiens 19 ZNF426 24 110 108 CCDS HistoryNCBI Gene:79088Re-query CCDS DB by CCDS ID:82285.1Re-query CCDS DB by GeneID:79088See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82285.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000589289.1 ENSP00000466469.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000589289.1Link to Ensembl Protein Viewer:ENSP00000466469.1Re-query CCDS DB by Nucleotide ID:ENST00000589289Re-query CCDS DB by Protein ID:ENSP00000466469
Original member Current member NCBI NM_001318056.2 NP_001304985.1 Accepted alive Link to Nucleotide Sequence:NM_001318056.2Link to Protein Sequence:NP_001304985.1Re-query CCDS DB by Nucleotide ID:NM_001318056Re-query CCDS DB by Protein ID:NP_001304985Link to BLAST:NP_001304985.1

Chromosomal Locations for CCDS 82285.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 9529605 9529636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 9532845 9532925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 9533840 9533966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 9535188 9535279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 9536208 9536232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (357 nt):
ATGGCAGCTGCTGATTTGTCCCATGGACATTATCTTTCTGGGGACCCAGTTTGCCTTCATGAAGAAAAGA
CACCAGCAGGAAGAATAGTGGCTGACTGCCTAACAGATTGTTATCAGGATTCAGTGACCTTTGACGATGT
GGCTGTGGACTTCACCCAGGAGGAGTGGACTTTACTGGACTCAACTCAGAGAAGCCTCTACAGTGACGTG
ATGCTGGAGAACTACAAGAACCTGGCCACAGTAGGAGGTCAGATCATCAAACCCAGTCTAATCTCTTGGT
TGGAACAAGAAGAGTCAAGGACAGTTCAGGGAGGAGTTCTCCAAGGAAGGAAAACACAATGGAAGGGAAC
TCTGTGA

Translation (118 aa):
MAAADLSHGHYLSGDPVCLHEEKTPAGRIVADCLTDCYQDSVTFDDVAVDFTQEEWTLLDSTQRSLYSDV
MLENYKNLATVGGQIIKPSLISWLEQEESRTVQGGVLQGRKTQWKGTL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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