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Report for CCDS82274.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82274.1 Public Homo sapiens 19 ZNF57 24 110 108 CCDS HistoryNCBI Gene:126295Re-query CCDS DB by CCDS ID:82274.1Re-query CCDS DB by GeneID:126295See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82274.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000523428.5 ENSP00000430223.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000523428.5Link to Ensembl Protein Viewer:ENSP00000430223.1Re-query CCDS DB by Nucleotide ID:ENST00000523428Re-query CCDS DB by Protein ID:ENSP00000430223
Original member Current member NCBI NM_001319083.2 NP_001306012.1 Accepted alive Link to Nucleotide Sequence:NM_001319083.2Link to Protein Sequence:NP_001306012.1Re-query CCDS DB by Nucleotide ID:NM_001319083Re-query CCDS DB by Protein ID:NP_001306012Link to BLAST:NP_001306012.1

Chromosomal Locations for CCDS 82274.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 2915615 2915648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 2916078 2916249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 2916924 2918289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1572 nt):
ATGCTGGAGACCTTCCGGAACCTGGCCTCAGTAGATGATGGGACTCAATTTAAAGCCAATGGGTCAGTTT
CTCTGCAGGATATGTACGGGCAAGAAAAATCTAAGGAACAGACAATACCAAACTTCACAGGAAATAATTC
CTGTGCCTACACTTTAGAAAAAAATTGTGAAGGCTATGGCACTGAAGACCACCACAAAAATCTGAGAAAT
CATATGGTGGACAGATTCTGTACACATAATGAAGGTAATCAATATGGAGAAGCCATCCATCAAATGCCAG
ATCTTACCCTGCACAAGAAAGTTTCTGCTGGAGAAAAACCATATGAATGCACCAAGTGCAGGACAGTCTT
CACGCATCTTTCTTCTCTTAAAAGGCACGTCAAGTCTCACTGTGGACGAAAAGCACCTCCAGGTGAGGAA
TGTAAGCAGGCCTGCATTTGTCCCTCACACCTACACAGTCACGGAAGAACTGACACTGAGGAGAAGCCGT
ATAAGTGTCAAGCATGTGGGCAAACTTTCCAACATCCTCGTTACCTCTCCCACCACGTAAAGACTCACAC
AGCAGAGAAAACCTACAAATGCGAGCAGTGTCGGATGGCGTTTAATGGGTTCGCAAGCTTCACTAGACAT
GTGAGAACTCACACAAAAGACAGGCCATATAAATGTCAGGAATGTGGGAGAGCCTTCATTTATCCCTCGA
CATTTCAAAGACACATGACAACACACACTGGAGAGAAGCCCTATAAATGTCAGCACTGTGGGAAAGCCTT
CACTTACCCCCAGGCTTTTCAAAGACATGAGAAGACGCACACGGGAGAGAAGCCCTATGAATGCAAGCAG
TGTGGGAAAACATTCAGTTGGTCTGAAACCTTGCGAGTCCACATGAGGATCCACACTGGGGACAAACTCT
ATAAATGTGAACACTGTGGGAAGGCTTTTACCTCTTCCAGATCATTCCAAGGTCATTTGAGGACGCACAC
TGGAGAGAAACCTTATGAGTGTAAACAATGTGGGAAAGCCTTCACTTGGTCCTCAACGTTTAGAGAACAT
GTGAGAATTCACACGCAAGAGCAGCTCTATAAATGTGAACAATGTGGGAAGGCTTTTACCTCTTCCAGAT
CATTCCGAGGTCATTTGAGGACGCACACTGGAGAGAAGCCTTATGAGTGTAAACAATGTGGAAAAACCTT
CACTTGGTCCTCAACGTTTAGAGAACATGTGAGAATTCACACGCAAGAGCAGCTCCATAAATGTGAACAC
TGTGGGAAGGCCTTTACCTCTTCCAGAGCATTCCAAGGTCATTTGAGGATGCACACTGGAGAGAAGCCTT
ATGAGTGTAAACAATGTGGAAAAACCTTCACTTGGTCCTCAACCTTACATAATCATGTGAGGATGCACAC
TGGAGAGAAACCTCACAAATGTAAACAATGTGGGATGTCCTTCAAGTGGCACTCCTCCTTCCGGAACCAT
CTGAGGATGCACACAGGACAGAAATCCCACGAATGTCAGTCATACTCAAAAGCCTTCAGTTGCCAAGTCA
TTCTTTCTAAAACCAGTGAGAGCACACACTAA

Translation (523 aa):
MLETFRNLASVDDGTQFKANGSVSLQDMYGQEKSKEQTIPNFTGNNSCAYTLEKNCEGYGTEDHHKNLRN
HMVDRFCTHNEGNQYGEAIHQMPDLTLHKKVSAGEKPYECTKCRTVFTHLSSLKRHVKSHCGRKAPPGEE
CKQACICPSHLHSHGRTDTEEKPYKCQACGQTFQHPRYLSHHVKTHTAEKTYKCEQCRMAFNGFASFTRH
VRTHTKDRPYKCQECGRAFIYPSTFQRHMTTHTGEKPYKCQHCGKAFTYPQAFQRHEKTHTGEKPYECKQ
CGKTFSWSETLRVHMRIHTGDKLYKCEHCGKAFTSSRSFQGHLRTHTGEKPYECKQCGKAFTWSSTFREH
VRIHTQEQLYKCEQCGKAFTSSRSFRGHLRTHTGEKPYECKQCGKTFTWSSTFREHVRIHTQEQLHKCEH
CGKAFTSSRAFQGHLRMHTGEKPYECKQCGKTFTWSSTLHNHVRMHTGEKPHKCKQCGMSFKWHSSFRNH
LRMHTGQKSHECQSYSKAFSCQVILSKTSESTH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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