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Report for CCDS81996.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81996.1 Public Homo sapiens 16 TMEM208 24 110 108 CCDS HistoryNCBI Gene:29100Re-query CCDS DB by CCDS ID:81996.1Re-query CCDS DB by GeneID:29100See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81996.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000563953.5 ENSP00000462217.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000563953.5Link to Ensembl Protein Viewer:ENSP00000462217.1Re-query CCDS DB by Nucleotide ID:ENST00000563953Re-query CCDS DB by Protein ID:ENSP00000462217
Original member Current member NCBI NM_001318217.2 NP_001305146.1 Accepted alive Link to Nucleotide Sequence:NM_001318217.2Link to Protein Sequence:NP_001305146.1Re-query CCDS DB by Nucleotide ID:NM_001318217Re-query CCDS DB by Protein ID:NP_001305146Link to BLAST:NP_001305146.1

Chromosomal Locations for CCDS 81996.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 67228543 67228631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67228797 67228881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67228976 67229113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (312 nt):
ATGAGCTCGATGGCACGAGCAGCGTTCTCTGAGGATGGGGCCCTGATGGATGGTGGCATGGACCTCAACA
TGGAGCAGGGCATGGCAGAGCACCTTAAGGATGTGATCCTACTGACAGCCATCGTGCAGGTGCTCAGCTG
CTTCTCTCTCTATGTCTGGTCCTTCTGGCTTCTGGCTCCAGGCCGGGCCCTTTACCTCCTGTGGGTGAAT
GTGCTGGGCCCCTGGTTCACTGCAGACAGTGGCACCCCAGCACCAGAGCACAATGAGAAACGGCAGCGCC
GACAGGAGCGGCGGCAGATGAAGCGGTTATAG

Translation (103 aa):
MSSMARAAFSEDGALMDGGMDLNMEQGMAEHLKDVILLTAIVQVLSCFSLYVWSFWLLAPGRALYLLWVN
VLGPWFTADSGTPAPEHNEKRQRRQERRQMKRL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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