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Report for CCDS81760.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81760.1 Public Homo sapiens 13 USPL1 24 110 108 CCDS HistoryNCBI Gene:10208Re-query CCDS DB by CCDS ID:81760.1Re-query CCDS DB by GeneID:10208See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81760.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000614860.1 ENSP00000480656.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000614860.1Link to Ensembl Protein Viewer:ENSP00000480656.1Re-query CCDS DB by Nucleotide ID:ENST00000614860Re-query CCDS DB by Protein ID:ENSP00000480656
Original member Current member NCBI NM_001321533.2 NP_001308462.1 Accepted alive Link to Nucleotide Sequence:NM_001321533.2Link to Protein Sequence:NP_001308462.1Re-query CCDS DB by Nucleotide ID:NM_001321533Re-query CCDS DB by Protein ID:NP_001308462Link to BLAST:NP_001308462.1
Original member Current member NCBI NM_001321534.2 NP_001308463.1 Accepted alive Link to Nucleotide Sequence:NM_001321534.2Link to Protein Sequence:NP_001308463.1Re-query CCDS DB by Nucleotide ID:NM_001321534Re-query CCDS DB by Protein ID:NP_001308463Link to BLAST:NP_001308463.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001308462.1 763 Q5W0Q7-2 763 100% 0 0
NP_001308463.1 763 Q5W0Q7-2 763 100% 0 0

Chromosomal Locations for CCDS 81760.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 30642633 30642757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 30646932 30647057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 30653148 30653305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 30657474 30659356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2292 nt):
ATGGAAAGCCCTGTGTTTGCATTTCCCCTGCTCTTAAAACTAGAAACCCACATTGAAAAGCTCTTCCTAT
ATTCTTTTTCTTGGGACTTTGAATGTTCGCAGTGTGGACACCAATATCAAAACAGGCATATGAAGAGTCT
GGTCACCTTTACAAATGTCATCCCTGAGTGGCACCCACTTAATGCTGCCCATTTTGGTCCATGTAACAAT
TGCAACAGTAAATCACAAATAAGAAAAATGGTATTAGAAAAAGTATCTCCCATATTCATGTTGCACTTTG
TAGAAGGCTTACCACAGAATGACTTGCAGCACTATGCATTTCATTTTGAAGGCTGTCTTTATCAGATAAC
TTCTGTAATTCAGTATCGAGCAAATAATCATTTTATAACATGGATTTTAGATGCTGATGGAAGTTGGCTG
GAATGTGATGACTTAAAAGGCCCATGTTCTGAAAGGCACAAGAAATTTGAAGTTCCTGCTTCAGAGATAC
ATATTGTTATTTGGGAAAGAAAAATATCCCAAGTGACAGATAAAGAAGCTGCCTGCCTTCCACTTAAAAA
GACTAATGACCAACACGCTCTCAGTAATGAGAAACCAGTATCTTTAACATCGTGTTCTGTGGGTGATGCT
GCCTCAGCTGAAACAGCCTCAGTAACTCACCCTAAAGATATATCAGTTGCCCCTCGTACTCTTTCACAGG
ACACAGCTGTAACTCATGGAGATCATTTACTTTCAGGTCCAAAAGGTTTGGTTGACAATATTTTACCTCT
GACACTTGAAGAAACTATCCAGAAAACAGCCTCAGTTTCACAGTTAAATTCTGAAGCTTTCCTGTTAGAA
AATAAACCTGTAGCAGAAAATACAGGAATTCTCAAAACCAATACTTTGCTATCACAAGAATCACTAATGG
CTTCTTCAGTATCAGCTCCATGTAATGAAAAGCTTATTCAAGACCAATTTGTGGACATAAGTTTTCCATC
CCAAGTTGTAAATACAAACATGCAGTCAGTACAGCTGAATACAGAAGATACTGTAAATACTAAATCTGTG
AATAATACTGATGCTACTGGTCTTATACAGGGAGTGAAGTCAGTAGAAATTGAGAAGGACGCTCAGTTAA
AACAATTCCTTACACCAAAAACTGAACAATTAAAACCAGAACGTGTCACATCTCAGGTATCTAATTTGAA
GAAAAAAGAAACTACAGCAGATTCTCAAACCACAACATCTAAGTCATTACAGAATCAGTCTCTGAAAGAA
AATCAGAAGAAGCCATTTGTGGGAAGTTGGGTTAAAGGCTTAATAAGCAGGGGTGCTTCTTTTATGCCAC
TCTGTGTTTCAGCTCATAATAGAAACACTATAACTGATTTACAACCTTCAGTTAAAGGGGTAAATAATTT
TGGTGGCTTTAAAACTAAAGGTATAAACCAGAAGGCCAGCCACGTATCCAAGAAAGCTCGTAAGAGTGCA
AGTAAGCCTCCTCCCATCAGTAAGCCACCAGCAGGCCCTCCATCGTCTAATGGCACAGCTGCCCACCCAC
ATGCTCATGCTGCTTCAGAAGTTTTGGAAAAGTCTGGAAGCACCTCATGTGGAGCTCAACTCAACCACAG
TTCTTATGGGAATGGTATTTCTTCAGCAAACCATGAAGACTTGGTGGAAGGTCAGATTCATAAACTTCGT
CTAAAACTTCGTAAAAAGCTAAAGGCAGAAAAGAAGAAATTAGCTGCTCTTATGTCTTCCCCGCAAAGCA
GAACAGTTCGAAGTGAAAATCTAGAACAGGTGCCCCAGGATGGGTCTCCAAATGATTGTGAATCAATAGA
GGACTTGTTAAATGAGCTACCATATCCAATTGATATTGCCAGTGAGTCTGCATGCACCACTGTTCCTGGT
GTTTCCCTGTACAGTAGTCAAACTCATGAAGAAATTTTAGCGGAATTATTGTCTCCTACACCTGTTTCAA
CAGAGCTGTCAGAAAATGGGGAAGGTGACTTTAGGTATTTGGGAATGGGAGATAGTCATATCCCACCACC
AGTACCAAGTGAATTCAATGATGTTTCCCAGAACACACATCTGAGACAGGACCATAATTATTGTAGCCCC
ACCAAGAAAAATCCATGTGAAGTTCAGCCAGACTCTCTGACAAATAATGCCTGCGTTAGAACATTAAACT
TGGAGAGTCCGATGAAGACTGATATTTTCGATGAGTTTTTTTCCTCCTCAGCATTAAATGCTTTAGCAAA
TGACACATTAGACCTACCTCATTTCGATGAATATCTGTTTGAGAATTATTGA

Translation (763 aa):
MESPVFAFPLLLKLETHIEKLFLYSFSWDFECSQCGHQYQNRHMKSLVTFTNVIPEWHPLNAAHFGPCNN
CNSKSQIRKMVLEKVSPIFMLHFVEGLPQNDLQHYAFHFEGCLYQITSVIQYRANNHFITWILDADGSWL
ECDDLKGPCSERHKKFEVPASEIHIVIWERKISQVTDKEAACLPLKKTNDQHALSNEKPVSLTSCSVGDA
ASAETASVTHPKDISVAPRTLSQDTAVTHGDHLLSGPKGLVDNILPLTLEETIQKTASVSQLNSEAFLLE
NKPVAENTGILKTNTLLSQESLMASSVSAPCNEKLIQDQFVDISFPSQVVNTNMQSVQLNTEDTVNTKSV
NNTDATGLIQGVKSVEIEKDAQLKQFLTPKTEQLKPERVTSQVSNLKKKETTADSQTTTSKSLQNQSLKE
NQKKPFVGSWVKGLISRGASFMPLCVSAHNRNTITDLQPSVKGVNNFGGFKTKGINQKASHVSKKARKSA
SKPPPISKPPAGPPSSNGTAAHPHAHAASEVLEKSGSTSCGAQLNHSSYGNGISSANHEDLVEGQIHKLR
LKLRKKLKAEKKKLAALMSSPQSRTVRSENLEQVPQDGSPNDCESIEDLLNELPYPIDIASESACTTVPG
VSLYSSQTHEEILAELLSPTPVSTELSENGEGDFRYLGMGDSHIPPPVPSEFNDVSQNTHLRQDHNYCSP
TKKNPCEVQPDSLTNNACVRTLNLESPMKTDIFDEFFSSSALNALANDTLDLPHFDEYLFENY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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