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Report for CCDS81735.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81735.1 Public Homo sapiens 12 PWP1 24 110 108 CCDS HistoryNCBI Gene:11137Re-query CCDS DB by CCDS ID:81735.1Re-query CCDS DB by GeneID:11137See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81735.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000541166.1 ENSP00000445249.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000541166.1Link to Ensembl Protein Viewer:ENSP00000445249.1Re-query CCDS DB by Nucleotide ID:ENST00000541166Re-query CCDS DB by Protein ID:ENSP00000445249
Original member Current member NCBI NM_001317962.2 NP_001304891.1 Accepted alive Link to Nucleotide Sequence:NM_001317962.2Link to Protein Sequence:NP_001304891.1Re-query CCDS DB by Nucleotide ID:NM_001317962Re-query CCDS DB by Protein ID:NP_001304891Link to BLAST:NP_001304891.1

Chromosomal Locations for CCDS 81735.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 107688670 107688802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107692814 107692899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107693000 107693096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107696474 107696584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107697467 107697597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107699373 107699434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107702935 107703031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107703685 107703746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107704636 107704747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107708926 107709016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107709111 107709232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107710405 107710510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107712111 107712220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1320 nt):
ATGCAGAGTGCACGCACCCAGGCACGCCCAAGAGAGCCCCTGGAGGATGGTGACCCAGAGGATGACAGGA
CGCTTGATGATGATGAGCTGGCTGAGTACGACTTAGATAAATATGATGAGGAAGGTGACCCAGATGCTGA
GACTCTTGGTGAATCTCTCTTGGGTCTTACGGTCTACGGGAGTAATGATCAAGATCCTTACGTTACTCTG
AAAGATACAGAACAATATGAACGTGAAGATTTCTTGATTAAGCCCAGTGATAATCTTATAGTTTGTGGCC
GAGCTGAACAGGACCAGTGCAATTTAGAGGTGCATGTTTATAATCAAGAAGAAGACTCTTTTTATGTACA
CCATGATATACTCTTGTCTGCATATCCTCTGAGTGTGGAATGGCTGAATTTTGATCCTAGCCCAGATGAT
TCTACTGGAAATTACATTGCTGTAGGAAACATGACCCCTGTTATTGAAGTGTGGGACCTTGATATAGTGG
ACTCTTTAGAGCCAGTCTTCACACTCGGAAGTAAACTTTCAAAAAAGAAGAAAAAGAAAGGAAAGAAGAG
TTCCTCAGCAGAAGGGCATACCGATGCTGTCCTTGACCTTTCATGGAATAAGCTAATCAGAAATGTTTTA
GCAAGTGCATCAGCTGACAACACTGTAATTCTGTGGGATATGTCCTTGGGGAAACCAGCAGCTAGCCTCG
CTGTACACACAGACAAGGTCCAAACACTGCAGTTTCATCCATTTGAAGCACAGACTCTGATTTCTGGCTC
ATATGATAAGTCAGTGGCTTTGTATGACTGCCGAAGTCCAGATGAAAGCCATCGAATGTGGCGATTCAGT
GGGCAGATAGAGAGAGTGACTTGGAATCACTTTTCACCTTGTCATTTCTTGGCCAGTACAGATGACGGCT
TTGTATATAATTTGGATGCACGTTCAGATAAGCCAATTTTTACACTTAATGCACACAATGATGAAATCTC
TGGTCTTGATCTTAGCAGTCAAATCAAGGGCTGTCTCGTGACTGCTTCAGCTGACAAATACGTGAAGATC
TGGGACATCTTAGGAGATAGGCCAAGTCTAGTTCATTCTAGGGACATGAAAATGGGAGTTCTCTTCTGTT
CTTCATGTTGCCCTGATTTGCCATTTATTTATGCCTTTGGAGGTCAAAAAGAAGGGCTTCGGGTCTGGGA
TATAAGCACAGTCTCTTCAGTAAATGAAGCATTTGGAAGACGAGAGAGGCTTGTTCTTGGGAGTGCAAGA
AATTCATCTATTAGTGGCCCTTTTGGCAGCAGGAGCTCAGATACACCCATGGAGTCTTAA

Translation (439 aa):
MQSARTQARPREPLEDGDPEDDRTLDDDELAEYDLDKYDEEGDPDAETLGESLLGLTVYGSNDQDPYVTL
KDTEQYEREDFLIKPSDNLIVCGRAEQDQCNLEVHVYNQEEDSFYVHHDILLSAYPLSVEWLNFDPSPDD
STGNYIAVGNMTPVIEVWDLDIVDSLEPVFTLGSKLSKKKKKKGKKSSSAEGHTDAVLDLSWNKLIRNVL
ASASADNTVILWDMSLGKPAASLAVHTDKVQTLQFHPFEAQTLISGSYDKSVALYDCRSPDESHRMWRFS
GQIERVTWNHFSPCHFLASTDDGFVYNLDARSDKPIFTLNAHNDEISGLDLSSQIKGCLVTASADKYVKI
WDILGDRPSLVHSRDMKMGVLFCSSCCPDLPFIYAFGGQKEGLRVWDISTVSSVNEAFGRRERLVLGSAR
NSSISGPFGSRSSDTPMES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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