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Report for CCDS81569.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81569.1 Public Homo sapiens 11 TMEM138 24 110 108 CCDS HistoryNCBI Gene:51524Re-query CCDS DB by CCDS ID:81569.1Re-query CCDS DB by GeneID:51524See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81569.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000381787.2 ENSP00000371206.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000381787.2Link to Ensembl Protein Viewer:ENSP00000371206.2Re-query CCDS DB by Nucleotide ID:ENST00000381787Re-query CCDS DB by Protein ID:ENSP00000371206
Original member Current member NCBI NM_001330281.2 NP_001317210.1 Accepted alive Link to Nucleotide Sequence:NM_001330281.2Link to Protein Sequence:NP_001317210.1Re-query CCDS DB by Nucleotide ID:NM_001330281Re-query CCDS DB by Protein ID:NP_001317210Link to BLAST:NP_001317210.1

Chromosomal Locations for CCDS 81569.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 61366091 61366216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 61367923 61367998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 61368597 61368709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (315 nt):
ATGTTCTTCAACACCTTCGTCTTCCAGGCTGGCCTGGTCAACCTCCTATTCCATAAGTTCAAAGGGACCA
TCATCCTGACAGCTGTGTACTTTGCCCTCAGCATCTCCCTTCATGTCTGGGTCATGAACTTACGCTGGAA
AAACTCCAACAGCTTCATATGGACAGATGGACTTCAAATGCTGTTTGTATTCCAGAGACTAGCAGCAGTG
TTGTACTGCTACTTCTATAAACGGACAGCCGTAAGACTAGGCGATCCTCACTTCTACCAGGACTCTTTGT
GGCTGCGCAAGGAGTTCATGCAAGTTCGAAGGTGA

Translation (104 aa):
MFFNTFVFQAGLVNLLFHKFKGTIILTAVYFALSISLHVWVMNLRWKNSNSFIWTDGLQMLFVFQRLAAV
LYCYFYKRTAVRLGDPHFYQDSLWLRKEFMQVRR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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