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Report for CCDS8140.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8140.1 Public Homo sapiens 11 MRPL11 24 110 108 CCDS HistoryNCBI Gene:65003Re-query CCDS DB by CCDS ID:8140.1Re-query CCDS DB by GeneID:65003See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8140.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000329819.4 ENSP00000329630.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000329819.4Link to Ensembl Protein Viewer:ENSP00000329630.4Re-query CCDS DB by Nucleotide ID:ENST00000329819Re-query CCDS DB by Protein ID:ENSP00000329630
Original member Current member NCBI NM_170739.4 NP_733935.1 Accepted alive Link to Nucleotide Sequence:NM_170739.4Link to Protein Sequence:NP_733935.1Re-query CCDS DB by Nucleotide ID:NM_170739Re-query CCDS DB by Protein ID:NP_733935Link to BLAST:NP_733935.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_733935.1 181 Q9Y3B7-3 181 100% 0 0

Chromosomal Locations for CCDS 8140.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 66436837 66436909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66437104 66437263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66437350 66437443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66438164 66438259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66438632 66438754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (546 nt):
ATGTCAAAGCTCGGCCGGGCCGCCCGGGGCCTCAGGAAGCCCGAGGTCGGCGGTGTGATCCGGGCGATCG
TGCGGGCAGGCCTGGCCATGCCCGGGCCCCCACTAGGCCCAGTGCTGGGTCAGAGAGGCGTTTCCATCAA
CCAGTTTTGCAAGGAGTTCAATGAGAGGACAAAGGACATCAAGGAAGGCATTCCTCTGCCTACCAAGATT
TTAGTGAAGCCTGACAGGACATTTGAAATTAAGATTGGACAGCCCACTGTTTCCTACTTCCTGAAGGCAG
CAGCTGGGATTGAAAAGGGGGCCCGGCAAACAGGGAAAGAGGTGGCAGGCCTGGTGACCTTGAAGCATGT
GTATGAGATTGCCCGCATCAAAGCTCAGGATGAGGCATTTGCCCTGCAGGATGTACCCCTGTCGTCTGTT
GTCCGCTCCATCATCGGGTCTGCCCGTTCTCTGGGCATTCGCGTGGTGAAGGAACGTTGTTCTGCAAATG
TTCTAAGAAATGGAAAGATCTCCATGAAGGATCCAAGTGGGAGAAGTTCAGTGTGA

Translation (181 aa):
MSKLGRAARGLRKPEVGGVIRAIVRAGLAMPGPPLGPVLGQRGVSINQFCKEFNERTKDIKEGIPLPTKI
LVKPDRTFEIKIGQPTVSYFLKAAAGIEKGARQTGKEVAGLVTLKHVYEIARIKAQDEAFALQDVPLSSV
VRSIIGSARSLGIRVVKERCSANVLRNGKISMKDPSGRSSV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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