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Report for CCDS81323.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81323.1 Public Homo sapiens 1 CC2D1B 24 110 108 CCDS HistoryNCBI Gene:200014Re-query CCDS DB by CCDS ID:81323.1Re-query CCDS DB by GeneID:200014See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81323.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000284376.8 ENSP00000284376.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000284376.8Link to Ensembl Protein Viewer:ENSP00000284376.3Re-query CCDS DB by Nucleotide ID:ENST00000284376Re-query CCDS DB by Protein ID:ENSP00000284376
Original member Current member NCBI NM_001330585.2 NP_001317514.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001330585.2Link to Protein Sequence:NP_001317514.1Re-query CCDS DB by Nucleotide ID:NM_001330585Re-query CCDS DB by Protein ID:NP_001317514Link to BLAST:NP_001317514.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001317514.1 852 Q5T0F9-2 852 100% 0 0

Chromosomal Locations for CCDS 81323.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 52353519 52353647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52354608 52354698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52354840 52354939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52355398 52355449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52355608 52355666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52355771 52355844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52356186 52356302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52356384 52356442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52357001 52357126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52357526 52357698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52357781 52357898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52358331 52358461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52358686 52358758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52359027 52359157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52359250 52359357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52359459 52359534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52359705 52359883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52360074 52360233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52360424 52360549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52360974 52361132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52361513 52361616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52362602 52362746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52364552 52364620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2559 nt):
ATGATGCCAGGGCCAAGACCTCGGAAGGGCCCTCAGGCCAGAGGCCAAGGGGTGGCCGCTGCCAAGCAGA
TGGGGCTCTTTATGGAGTTTGGCCCTGAGGACATGCTGCTGGGCATGGATGAGGCTGAAGATGATGAGGA
CCTGGAGGCTGAGCTGCTGGCTCTCACAGGGGAAGCACAAACCACAGGCAAGAAGCCAGCACCCAAGGGG
CAGGCCCCCCTGCCCATGGCCCACATCGAGAAGTTGGCGGCAGACTGTATGCGGGATGTGGAGGAGGAGG
AGGAGGAGGAAGGGCTGGAGGAAGATGCAGAGCTGCTGACGGAGCTGCAGGAGGTCTTAGGTGTGGACGA
GGAGACTGAGCCCCTGGATGGTGATGAGGTAGCTGACCCAGGCGGCTCTGAGGAGGAGAACGGCCTAGAA
GACACTGAACCTCCAGTGCAGACAGCCGTCCTGACAGCTTCAGCCCCAGCAGCTCAGGCCGGAGCATCTC
AGGGGCTACACGCTTTGCTGGAGGAACGGATTCACAACTACCGAGAGGCTGCGGCCAGTGCCAAGGAGGC
AGGCGAAGCAGCCAAAGCCAGGCGCTGCGAGCGCGGCCTGAAGACCTTGGAGTCGCAGCTAGCCTCTGTG
AGGAGAGGCAGAAAGATCAATGAGGATGAGATCCCACCTCCAGTGGCCTTAGGAAAGCGGCCCCTGGCCC
CCCAGGAACCAGCCAACAGGAGCCCTGAGACAGACCCTCCAGCTCCCCCTGCCTTGGAGTCAGACAACCC
CTCCCAACCTGAGACCAGCCTCCCTGGCATTTCTGCCCAGCCCGTTTCAGACTTAGACCCAGACCCGCGG
GCCCTGCTGTCATCCCGACAGAGAGAGTACAAAGTGGCTGCCCTCAGTGCCAAGCGGGCTGGAGAGCTAG
ACCGTGCCCGAGAGCTCATGAGGATTGGGAAGAGATTCGGTGCTGTCCTGGAGGCCCTGGAGAAGGGGCA
GCCCGTGGATCTGAGTGCCATGCCCCCGGCACCTGAGGATCTGAAGCCCCAGCAGGCTTCTCAGGCTCCC
ACAGCACCCTCAGTCATTCCCCCAGCCGTGGAGCGAGTGCAGCCAGTGATGGCCCCTGACGTCCCAGCAA
CCCCAGTGGCCCCTACAGAGTCACAGACAGTGCTGGATGCCCTGCAGCAGAGGCTGAACAAGTACCGCGA
GGCGGGCATCCAGGCCCGGAGTGGTGGGGACGAGCGCAAGGCTCGGATGCATGAGCGCATTGCCAAGCAA
TATCAAGATGCTATTCGAGCACACCGAGCAGGACGGAAAGTCAACTTTGCTGAATTGCCTGTTCCTCCAG
GATTTCCCCCCATCCCTGGCCTGGAGTCCACTATGGGTGTTGAGGAGGACGCAGTGGCAGCGACATTGGC
AGCTGCAGAGAAACTGGCCTCTGCAGAGGATTCAGCCCCGGCTGATAAAGACGAGGACGAGGGTGAGCCC
CCAGCACAGGCCCCAGTGGCCAAGAAACCTGCACGGCCCACAGTCCCTTCATCCCAGCGCCTGCCTGAGC
CCAGGGCCTCAAGTTCTAAGGAGTCACCGAGTCCATCTGTGCGGGAGCAGCTGGCACTGCTGGAGGCACG
GAAACTGCAGTATCAGCGGGCAGCCCTGCAGGCCAAGCGCAGCCAGGACCTGGAGCAGGCCAAAGCCTAT
CTGCGGGTAGCCAAATGGCTTGAGGCTCAGATCATCCAGGCCCGATCTGGCAGACCTGTTGATCTGTCCA
AGGTGCCTTCGCCCTTGACGGATGAGGAGGGTGACTTCATCCTCATCCACCATGAGGACCTGCGACTCTC
CCAGAAGGCGGAGGAGGTGTATGCCCAGCTGCAAAAAATGCTTCTGGAGCAACAAGAGAAGTGCCTGCTG
TTCTCCAAGCAGTTCATGCACCAGGGCAACGTGGCTGAGACCACCCGATTTGAGAAGCTTGCTCAGGACC
GCAAGAAACAGCTGGAGATCCTGCAGCTGGCCCAGGCTCAGGGCCTCGACCCTCCCACCCACCACTTTGA
GTTGAAGACATTCCAGACTGTGAGGATCTTCTCAGAACTCAACAGCACAGAAATGCATCTGATCATTGTC
CGGGGAATGAACCTCCCAGCCCCTCCAGGGGTGACTCCCGATGACCTGGATGCTTTTGTGCGGTTTGAGT
TTCACTACCCTAACTCGGACCAGGCTCAAAAAAGCAAAACAGCTGTGGTGAAGAACACAAACTCTCCAGA
ATTTGATCAACTCTTCAAACTAAACATCAACCGAAACCACCGGGGCTTCAAGAGGGTGATCCAGAGCAAA
GGCATCAAGTTTGAGATCTTCCACAAAGGGTCCTTCTTCAGAAGCGACAAGCTGGTTGGCACAGCACACC
TGAAACTGGAGCGGCTGGAGAATGAGTGTGAGATCAGAGAAATTGTGGAGGTCCTGGATGGAAGGAAGCC
CACCGGGGGGAAGCTGGAGGTGAAGGTGAGGCTGCGGGAGCCTCTGAGTGGCCAGGATGTGCAGATGGTC
ACTGAGAACTGGCTGGTTCTGGAGCCCAGGGGCTTGTGA

Translation (852 aa):
MMPGPRPRKGPQARGQGVAAAKQMGLFMEFGPEDMLLGMDEAEDDEDLEAELLALTGEAQTTGKKPAPKG
QAPLPMAHIEKLAADCMRDVEEEEEEEGLEEDAELLTELQEVLGVDEETEPLDGDEVADPGGSEEENGLE
DTEPPVQTAVLTASAPAAQAGASQGLHALLEERIHNYREAAASAKEAGEAAKARRCERGLKTLESQLASV
RRGRKINEDEIPPPVALGKRPLAPQEPANRSPETDPPAPPALESDNPSQPETSLPGISAQPVSDLDPDPR
ALLSSRQREYKVAALSAKRAGELDRARELMRIGKRFGAVLEALEKGQPVDLSAMPPAPEDLKPQQASQAP
TAPSVIPPAVERVQPVMAPDVPATPVAPTESQTVLDALQQRLNKYREAGIQARSGGDERKARMHERIAKQ
YQDAIRAHRAGRKVNFAELPVPPGFPPIPGLESTMGVEEDAVAATLAAAEKLASAEDSAPADKDEDEGEP
PAQAPVAKKPARPTVPSSQRLPEPRASSSKESPSPSVREQLALLEARKLQYQRAALQAKRSQDLEQAKAY
LRVAKWLEAQIIQARSGRPVDLSKVPSPLTDEEGDFILIHHEDLRLSQKAEEVYAQLQKMLLEQQEKCLL
FSKQFMHQGNVAETTRFEKLAQDRKKQLEILQLAQAQGLDPPTHHFELKTFQTVRIFSELNSTEMHLIIV
RGMNLPAPPGVTPDDLDAFVRFEFHYPNSDQAQKSKTAVVKNTNSPEFDQLFKLNINRNHRGFKRVIQSK
GIKFEIFHKGSFFRSDKLVGTAHLKLERLENECEIREIVEVLDGRKPTGGKLEVKVRLREPLSGQDVQMV
TENWLVLEPRGL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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