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Report for CCDS8130.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8130.1 Public Homo sapiens 11 KLC2 24 110 108 CCDS HistoryNCBI Gene:64837Re-query CCDS DB by CCDS ID:8130.1Re-query CCDS DB by GeneID:64837See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8130.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000316924.9 ENSP00000314837.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000316924.9Link to Ensembl Protein Viewer:ENSP00000314837.5Re-query CCDS DB by Nucleotide ID:ENST00000316924Re-query CCDS DB by Protein ID:ENSP00000314837
Original member Current member EBI ENST00000394067.7 ENSP00000377631.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000394067.7Link to Ensembl Protein Viewer:ENSP00000377631.2Re-query CCDS DB by Nucleotide ID:ENST00000394067Re-query CCDS DB by Protein ID:ENSP00000377631
Original member Current member EBI ENST00000417856.5 ENSP00000399403.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000417856.5Link to Ensembl Protein Viewer:ENSP00000399403.1Re-query CCDS DB by Nucleotide ID:ENST00000417856Re-query CCDS DB by Protein ID:ENSP00000399403
Original member Current member NCBI NM_001134775.2 NP_001128247.1 Accepted alive Link to Nucleotide Sequence:NM_001134775.2Link to Protein Sequence:NP_001128247.1Re-query CCDS DB by Nucleotide ID:NM_001134775Re-query CCDS DB by Protein ID:NP_001128247Link to BLAST:NP_001128247.1
Original member Current member NCBI NM_001134776.2 NP_001128248.1 Accepted alive Link to Nucleotide Sequence:NM_001134776.2Link to Protein Sequence:NP_001128248.1Re-query CCDS DB by Nucleotide ID:NM_001134776Re-query CCDS DB by Protein ID:NP_001128248Link to BLAST:NP_001128248.1
Original member Current member NCBI NM_001318734.2 NP_001305663.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001318734.2Link to Protein Sequence:NP_001305663.1Re-query CCDS DB by Nucleotide ID:NM_001318734Re-query CCDS DB by Protein ID:NP_001305663Link to BLAST:NP_001305663.1
Original member Current member NCBI NM_022822.3 NP_073733.1 Accepted alive Link to Nucleotide Sequence:NM_022822.3Link to Protein Sequence:NP_073733.1Re-query CCDS DB by Nucleotide ID:NM_022822Re-query CCDS DB by Protein ID:NP_073733Link to BLAST:NP_073733.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001128247.1 622 Q9H0B6-1 622 100% 0 0
NP_001128248.1 622 Q9H0B6-1 622 100% 0 0
NP_001305663.1 622 Q9H0B6-1 622 100% 0 0
NP_073733.1 622 Q9H0B6-1 622 100% 0 0

Chromosomal Locations for CCDS 8130.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 66258595 66258822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66261742 66261972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66262123 66262192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66262814 66263036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66263660 66263747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66263851 66263952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66264046 66264219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66264345 66264444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66265023 66265072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66265168 66265235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66265655 66265763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66265854 66266012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66266093 66266217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66266433 66266490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66266873 66266956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1869 nt):
ATGGCCATGATGGTGTTTCCGCGGGAGGAGAAGCTGAGCCAGGATGAGATCGTGCTGGGCACCAAGGCTG
TCATCCAGGGACTGGAGACTCTGCGTGGGGAGCATCGTGCCCTGCTGGCTCCTCTGGTTGCACCTGAGGC
CGGCGAAGCCGAGCCTGGCTCGCAGGAGCGCTGCATCCTCCTGCGTCGCTCCCTGGAAGCCATTGAGCTT
GGGCTGGGGGAGGCCCAGGTGATCTTGGCATTGTCGAGCCACCTGGGGGCTGTAGAATCAGAGAAGCAGA
AGCTGCGGGCGCAGGTGCGGCGTCTGGTGCAGGAGAACCAGTGGCTGCGTGAGGAGCTGGCGGGGACACA
GCAGAAGCTGCAGCGCAGTGAGCAGGCCGTGGCCCAGCTCGAGGAGGAGAAGCAGCACTTGCTGTTCATG
AGCCAGATCCGCAAGTTGGATGAAGACGCCTCCCCTAACGAGGAGAAGGGGGACGTCCCCAAAGACACAC
TGGATGACCTGTTCCCCAATGAGGATGAGCAGAGCCCAGCCCCTAGCCCAGGAGGAGGGGATGTGTCTGG
TCAGCATGGGGGCTACGAGATCCCGGCCCGGCTCCGCACCCTGCACAACCTGGTGATCCAATACGCCTCA
CAGGGCCGCTACGAGGTAGCTGTGCCACTCTGCAAGCAGGCACTCGAAGACCTGGAGAAGACGTCAGGCC
ACGACCACCCTGACGTTGCCACCATGCTGAACATCCTGGCACTGGTCTATCGGGATCAGAACAAGTACAA
GGAGGCTGCCCACCTGCTCAATGATGCTCTGGCCATCCGGGAGAAAACACTGGGCAAGGACCACCCAGCC
GTGGCTGCGACACTAAACAACCTGGCAGTCCTGTATGGCAAGAGGGGCAAGTACAAGGAGGCTGAGCCAT
TGTGCAAGCGGGCACTGGAGATCCGGGAGAAGGTCCTGGGCAAGTTTCACCCAGATGTGGCCAAGCAGCT
CAGCAACCTGGCCCTGCTGTGCCAGAACCAGGGCAAAGCTGAGGAGGTGGAATATTACTATCGGCGGGCA
CTGGAGATCTATGCTACACGCCTCGGGCCCGATGACCCCAATGTGGCCAAGACCAAGAACAACCTGGCTT
CCTGCTACCTGAAGCAGGGCAAGTACCAGGATGCGGAGACCTTGTACAAGGAGATCCTCACCCGCGCTCA
TGAGAAAGAGTTTGGCTCTGTCAATGGGGACAACAAGCCCATCTGGATGCACGCAGAGGAGCGGGAGGAA
AGCAAGGATAAGCGCCGGGACAGCGCCCCCTATGGGGAATACGGCAGCTGGTACAAGGCCTGTAAAGTAG
ACAGCCCCACAGTCAACACCACCCTGCGCAGCTTGGGGGCCCTATACCGGCGCCAGGGCAAGCTGGAAGC
CGCGCACACACTAGAGGACTGTGCCAGCCGTAACCGCAAGCAGGGTTTGGACCCCGCAAGCCAGACCAAG
GTGGTAGAACTGCTGAAAGATGGCAGTGGCAGGCGGGGAGACCGCCGCAGCAGCCGAGACATGGCTGGGG
GTGCCGGGCCTCGGTCTGAGTCTGACCTCGAGGACGTGGGACCTACAGCTGAGTGGAATGGGGATGGCAG
TGGCTCCTTGAGGCGCAGCGGTTCCTTTGGGAAACTCCGGGATGCCCTGAGGCGCAGCAGTGAGATGCTG
GTAAAGAAGCTGCAGGGGGGCACCCCCCAGGAGCCCCCTAACCCCAGGATGAAGCGGGCCAGTTCCCTCA
ACTTCCTCAACAAGAGCGTGGAAGAGCCGACCCAGCCTGGAGGCACAGGTCTCTCTGACAGCCGCACTCT
CAGCTCCAGCTCCATGGACCTCTCCCGACGAAGCTCCCTGGTGGGCTAA

Translation (622 aa):
MAMMVFPREEKLSQDEIVLGTKAVIQGLETLRGEHRALLAPLVAPEAGEAEPGSQERCILLRRSLEAIEL
GLGEAQVILALSSHLGAVESEKQKLRAQVRRLVQENQWLREELAGTQQKLQRSEQAVAQLEEEKQHLLFM
SQIRKLDEDASPNEEKGDVPKDTLDDLFPNEDEQSPAPSPGGGDVSGQHGGYEIPARLRTLHNLVIQYAS
QGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPA
VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLSNLALLCQNQGKAEEVEYYYRRA
LEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREE
SKDKRRDSAPYGEYGSWYKACKVDSPTVNTTLRSLGALYRRQGKLEAAHTLEDCASRNRKQGLDPASQTK
VVELLKDGSGRRGDRRSSRDMAGGAGPRSESDLEDVGPTAEWNGDGSGSLRRSGSFGKLRDALRRSSEML
VKKLQGGTPQEPPNPRMKRASSLNFLNKSVEEPTQPGGTGLSDSRTLSSSSMDLSRRSSLVG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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