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Report for CCDS81292.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81292.1 Public Homo sapiens 1 ZBTB8OS 24 110 108 CCDS HistoryNCBI Gene:339487Re-query CCDS DB by CCDS ID:81292.1Re-query CCDS DB by GeneID:339487See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81292.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373501.6 ENSP00000362600.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000373501.6Link to Ensembl Protein Viewer:ENSP00000362600.3Re-query CCDS DB by Nucleotide ID:ENST00000373501Re-query CCDS DB by Protein ID:ENSP00000362600
Original member Current member NCBI NM_001330475.2 NP_001317404.1 Accepted alive Link to Nucleotide Sequence:NM_001330475.2Link to Protein Sequence:NP_001317404.1Re-query CCDS DB by Nucleotide ID:NM_001330475Re-query CCDS DB by Protein ID:NP_001317404Link to BLAST:NP_001317404.1
Original member Current member NCBI NM_001366255.1 NP_001353184.1 Accepted alive Link to Nucleotide Sequence:NM_001366255.1Link to Protein Sequence:NP_001353184.1Re-query CCDS DB by Nucleotide ID:NM_001366255Re-query CCDS DB by Protein ID:NP_001353184Link to BLAST:NP_001353184.1

Chromosomal Locations for CCDS 81292.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 32621862 32621948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32627508 32627544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32631827 32631879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32633645 32633727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32633951 32634072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32634702 32634715 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (396 nt):
ATGTTTCAATCTTGGTTACACGCATGGGGAGATACTCTGGAGGAAGCATTTGAGCAATGTGCAATGGCCA
TGTTTGGTTACATGACAGATACTGGGACAGTGGAGCCCCTCCAAACAGTAGAAGTAGAAACCCAAGGAGA
TGACTTACAGTCTCTTCTGTTTCACTTTTTGGATGAATGGCTTTATAAGTTCAGTGCTGATGAATTCTTC
ATACCCCGGGAAGTGAAAGTACTTAGCATTGATCAAAGAAATTTCAAATTACGATCAATTGGGTGGGGAG
AAGAATTTTCATTGTCCAAGCACCCTCAGGGAACAGAAGTCAAAGCAATAACATATTCAGCAATGCAGGT
CTATAATGAAGAGAACCCGGAAGTTTTTGTGATCATTGACATTTAA

Translation (131 aa):
MFQSWLHAWGDTLEEAFEQCAMAMFGYMTDTGTVEPLQTVEVETQGDDLQSLLFHFLDEWLYKFSADEFF
IPREVKVLSIDQRNFKLRSIGWGEEFSLSKHPQGTEVKAITYSAMQVYNEENPEVFVIIDI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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