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Report for CCDS8122.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8122.2 Public Homo sapiens 11 C11orf68 24 110 108 CCDS HistoryNCBI Gene:83638Re-query CCDS DB by CCDS ID:8122.2Re-query CCDS DB by GeneID:83638See the combined annotation on chromosome 11 in Sequence Viewer

Public Note for CCDS 8122.1
The coding region has been updated to extend the N-terminus to one that is more supported by available transcript and conservation data.

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 8122.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000449692.3 ENSP00000409681.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000449692.3Link to Ensembl Protein Viewer:ENSP00000409681.3Re-query CCDS DB by Nucleotide ID:ENST00000449692Re-query CCDS DB by Protein ID:ENSP00000409681
Original member Current member NCBI NM_031450.4 NP_113638.2 Accepted alive Link to Nucleotide Sequence:NM_031450.4Link to Protein Sequence:NP_113638.2Re-query CCDS DB by Nucleotide ID:NM_031450Re-query CCDS DB by Protein ID:NP_113638Link to BLAST:NP_113638.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_113638.2 292 Q9H3H3-2 292 100% 0 0

Chromosomal Locations for CCDS 8122.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 65917459 65918215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65918910 65919031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (879 nt):
ATGGCGGCGGCGGCGGCGGCGGCCGTGGCGGGGGTGGGGCGCGGTGGCGGTGGCGCGGAGCCACGGCAGG
AGCGGAGCCGGGCCCGGGGCTGGGCCGGCGTCGAACGCAGCGAAGGCCGGAGGATGGAACCAGGTGAGGA
GCTGGAAGAGGAGGGCTCTCCAGGTGGCCGTGAGGATGGCTTCACCGCCGAGCACCTGGCTGCAGAGGCC
ATGGCAGCTGACATGGACCCCTGGCTAGTGTTTGATGCCCGCACAACGCCTGCCACTGAGCTGGATGCCT
GGCTGGCCAAGTACCCACCATCCCAAGTTACCCGCTATGGGGACCCCGGTTCACCCAACTCAGAGCCTGT
GGGCTGGATTGCAGTGTATGGGCAGGGCTACAGCCCCAACTCCGGGGACGTGCAGGGCCTGCAGGCAGCC
TGGGAAGCTCTGCAGACCAGTGGGCGGCCCATCACACCGGGTACCCTGCGCCAGCTCGCCATCACCCACC
ACGTGCTCTCGGGCAAGTGGCTTATGCATCTGGCACCGGGCTTCAAGCTGGACCACGCCTGGGCTGGCAT
TGCCCGGGCCGTGGTTGAAGGCCAGCTTCAGGTGGCCAAGGTGAGCCCACGTGCCAAGGAGGGTGGGCGC
CAGGTCATCTGTGTTTACACGGACGACTTCACGGACCGCTTGGGTGTACTGGAGGCGGATTCAGCCATCC
GTGCAGCGGGCATTAAGTGCCTGCTCACCTACAAGCCTGATGTCTACACCTACCTGGGCATCTACCGGGC
CAATCGCTGGCACCTCTGCCCCACTCTCTATGAGAGCCGTTTCCAGCTTGGGGGTAGTGCCCGTGGCTCC
CGAGTGCTTGACCGTGCCAACAACGTGGAACTGACCTAG

Translation (292 aa):
MAAAAAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGRRMEPGEELEEEGSPGGREDGFTAEHLAAEA
MAADMDPWLVFDARTTPATELDAWLAKYPPSQVTRYGDPGSPNSEPVGWIAVYGQGYSPNSGDVQGLQAA
WEALQTSGRPITPGTLRQLAITHHVLSGKWLMHLAPGFKLDHAWAGIARAVVEGQLQVAKVSPRAKEGGR
QVICVYTDDFTDRLGVLEADSAIRAAGIKCLLTYKPDVYTYLGIYRANRWHLCPTLYESRFQLGGSARGS
RVLDRANNVELT


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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