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Report for CCDS80777.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
80777.1 Public Mus musculus 7 Or10a3n 23 108 98 CCDS HistoryNCBI Gene:277935Re-query CCDS DB by CCDS ID:80777.1Re-query CCDS DB by GeneID:277935See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 80777.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000202706.1 ENSMUSP00000144271.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000202706.1Link to Ensembl Protein Viewer:ENSMUSP00000144271.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000202706Re-query CCDS DB by Protein ID:ENSMUSP00000144271
Original member Current member NCBI NM_207160.1 NP_997043.1 Accepted alive Link to Nucleotide Sequence:NM_207160.1Link to Protein Sequence:NP_997043.1Re-query CCDS DB by Nucleotide ID:NM_207160Re-query CCDS DB by Protein ID:NP_997043Link to BLAST:NP_997043.1

Chromosomal Locations for CCDS 80777.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 108893461 108894405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (945 nt):
ATGAGGAGGCAAAATCACAGCTCTACAGTTGAATTCATCCTCTTGGGATTTTCTAACTATCCTGAACTTC
AAGGTCAGATGTTTGGGGCTTTCCTAGTTATTTATCTGGTGACTGTGTTGGGAAATGCCATCATTATCAC
CATCATCTTCCTGGACCAGAGTTTGCACATCCCCATGTATTTGTTTCTGCAGAATTTATCTTTAGTGGAC
TTCTGTTTCAGCACAGTCATCACACCTGAAATACTGGTGATCCTGACTAGTGAGAAAGCGACCATTTCCT
TTGGTGGCTGTTTTGTGCAGATGTACTTCATTCTTCTCTTTGGTGCGACTGAGTGTTTTCTCCTGGGGGC
AATGGCTTATGATCGATTTGCTGCAATCTGCCACCCTCTGACCTACCCAGTGATTATGAGCAAAAGGACC
TTTGTGAAATTGGTGATGTGTCCATGGGTCTTGAGTATCATGACAGCTGTTTTGTCAGTCACATGGGTGG
CTAGCTTTCCCTACTGTGACCACAAGGAGATTAACCATCTCTTCTGTGAGATTCCTCCTGTGCTGGAGCT
TGCCTGTGCAGACACCTTCCTGTTTGAAGTCTATGCCTTCACAAGCACCATTTTGATCGTCATGGTCCCC
TTCTTGTTGATACTTTTGTCTTATACTCGAATTCTCTTCTCCATCCTGAAGATGCCATCCACTACAGGGA
GGCAGAAGGCCTTTTCTACGTGTGCCTCTCATCTCACCTCTGTCATCCTCTTCTATGGCACAGCCAGTAT
AACTTATCTACAGCCCAAATCCGGGTACTCACCAGACACCAAGAAACTGATGTCACTGGCATACACACTT
CTCACCCCTCTGCTGAATCCACTTATCTACAGCCTGAGAAACAAGGAGATGAAAAGGGCTGTGGTAAAAT
TATGGCAAAGAAAAGTGACTTTACACACAGGTTGA

Translation (314 aa):
MRRQNHSSTVEFILLGFSNYPELQGQMFGAFLVIYLVTVLGNAIIITIIFLDQSLHIPMYLFLQNLSLVD
FCFSTVITPEILVILTSEKATISFGGCFVQMYFILLFGATECFLLGAMAYDRFAAICHPLTYPVIMSKRT
FVKLVMCPWVLSIMTAVLSVTWVASFPYCDHKEINHLFCEIPPVLELACADTFLFEVYAFTSTILIVMVP
FLLILLSYTRILFSILKMPSTTGRQKAFSTCASHLTSVILFYGTASITYLQPKSGYSPDTKKLMSLAYTL
LTPLLNPLIYSLRNKEMKRAVVKLWQRKVTLHTG


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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