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Report for CCDS80687.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
80687.1 Public Mus musculus 7 Gmfg 23 108 98 CCDS HistoryNCBI Gene:63986Re-query CCDS DB by CCDS ID:80687.1Re-query CCDS DB by GeneID:63986See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 80687.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000108289.7 ENSMUSP00000103924.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000108289.7Link to Ensembl Protein Viewer:ENSMUSP00000103924.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000108289Re-query CCDS DB by Protein ID:ENSMUSP00000103924
Original member NCBI NM_001290550.1 NP_001277479.1 Updated not alive Link to Nucleotide Sequence:NM_001290550.1Link to Protein Sequence:NP_001277479.1Re-query CCDS DB by Nucleotide ID:NM_001290550Re-query CCDS DB by Protein ID:NP_001277479
Current member NCBI NM_001290550.2 NP_001277479.1 Accepted alive Link to Nucleotide Sequence:NM_001290550.2Link to Protein Sequence:NP_001277479.1Re-query CCDS DB by Nucleotide ID:NM_001290550Re-query CCDS DB by Protein ID:NP_001277479Link to BLAST:NP_001277479.1

Chromosomal Locations for CCDS 80687.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 28441692 28441718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28443220 28443269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28444853 28444935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28445917 28445990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28446372 28446443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (306 nt):
ATGGTGGTGCTGGAGGATGAACTCCAGAACATCTCCCCAGAAGAACTTAAGTTGGAATTGCCAGAGAGAC
AGCCCAGGTTTGTGGTCTACAGCTACAAGTACGTGCATGATGACGGCAGGGTGTCCTATCCTTTGTGCTT
CATCTTCTCCAGCCCCGTGGGCTGCAAGCCTGAACAACAGATGATGTACGCAGGAAGTAAAAACAGGCTG
GTGCAGACGGCGGAGCTTACCAAGGTGTTTGAAATCCGCACCACAGACGACCTCACCGAGACCTGGCTTA
AGGAAAAGTTAGCTTTCTTTCGTTGA

Translation (101 aa):
MVVLEDELQNISPEELKLELPERQPRFVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRL
VQTAELTKVFEIRTTDDLTETWLKEKLAFFR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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