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Report for CCDS80674.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
80674.1 Public Mus musculus 7 Zfp111 23 108 98 CCDS HistoryNCBI Gene:56707Re-query CCDS DB by CCDS ID:80674.1Re-query CCDS DB by GeneID:56707See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 80674.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000056683.2 ENSMUSP00000129484.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000056683.2Link to Ensembl Protein Viewer:ENSMUSP00000129484.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000056683Re-query CCDS DB by Protein ID:ENSMUSP00000129484
Original member Current member NCBI NM_001310670.1 NP_001297599.1 Accepted alive Link to Nucleotide Sequence:NM_001310670.1Link to Protein Sequence:NP_001297599.1Re-query CCDS DB by Nucleotide ID:NM_001310670Re-query CCDS DB by Protein ID:NP_001297599Link to BLAST:NP_001297599.1

Chromosomal Locations for CCDS 80674.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 24198082 24200042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24203370 24203514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2106 nt):
ATGTGCTTGCCGTCACAGGAGGCAGTGACATTCAGGGACGTGGCCGTGGTCTTCAGCGAGGAGGAGCTGG
GGCTGCTGGACGCTGCTCAGAGGAAGCTGTACCACGATGTGATGCTGGAGAACTTCAGGAACCTCCTGGC
AGTGGGAGGCCAGAGTCCAAATAAGATGGAGATTGTTGACGCAACAGGATTAAGGTGCCTTTCACTGGGG
CAGCTTCTCTGCTGGGGAGAAACAAGCCATAATATCAACAAACTAGCCAGAGCTCTAGAAGCTGTAATCA
ACACTCAGGGAAAGTGTTCTCACTCATTGGAGCAGTGCCACTCCTCCTGCCACAGGGTATCAGAAGAGCC
TCCCCGGGATTCTGAGGATAGCAGTTCTCCTGATCTGACAAATGACCATTCCAGCATTACTGAAAATCAG
GAATTTCTGTCTGGGAGAGCCCAGGGTTCTTGGGGTAAAAGACGTCTTAGGAAAAGACAGAACCATCAGA
AAAACTGTCTGCAGACTCTGATGAAAAACAAGCCACAGCTGCTGGCTCAGCATTCTCCTGTACATAGTAC
GCAGGAGGACACCAGGCATAGCTTCAGTGTGCCAGTTCAAGAAAGCATTTATCCAGGAAGAAAGCGCTAC
AGGTGTCAAGAGTGTGGCAAGGCTTTCCGTCAGAGCTCAGCACTTCAGACTCACCAGAGAGTGCACACAG
GGGAGAAGCCCTACAGGGGCAACAGCCGTGGGAAAAACTTCAGTCGTAGCTCGGATCTCAACATCCACCG
CCAAGTGCACACTAGAGAGAAACCTTACACATGTAAAGTGTGTAAGAAGCGCTTCATGCAGTGTTCGCTT
CTCCAGGCTCACAAGAGGATTCACACAGGAGAGAAGCCATATAAGTGTGGCGACTGTGGCAAGCGCTTCA
GCTGTATCTCGAACTTTCACATCCACCAGAGAGTCCACACTAAGAGCAAACCGTCCAAGTGTGATTATGG
GAAGCCCTTCAACTTGAGATGCAACTTCCACAGCCATCAGCGGGTCCACACAGGAGAGAAGCCATATAAA
TGTGAAGAGTGTGGGAAGGGTTTCACTTCAGCCTCAAGCTTCCAAAGACACCAGCGGGTCCATACAGGAG
AGAAGCCATTTGTCTGCAGTGTGTGTGGGAAGGGCTTCAGTCGGACTTCATACCTTCAGACTCATCAGAG
AGTGCACTCAGGGGACAAGCCTTATCAGTGCGACAGCTGTGGGAAGGGCTTCACTCAGTTGTCACACCTC
CAGGCCCACGAGAGAATTCACACAGATCAGAAGCCATATAAGTGTGGAGACTGTGGCAAACGCTTCAGCT
GCAGCTCAAACCTTCACACCCACCAGAGAGTCCACACAGGAGAGAAACCCTATAAATGTGAGGAGTGTGG
GAAAGGCTTCAGCCTTGTCTCTGGGCTACAGGCTCATCAAAGAGTCGAAACTGGCAAGAAGCCATTCAAA
TGCAATGCATGCCAGAAGCGATTTAGTCAGGCCTGGAACCTCCATGCCCACCAGAGGGTGCACACTGGGG
AGAAGCCCTACAAATGTGACACGTGTGGGAAAGCCTTTGGCCAGAGGTCTGGTCTCCAAATCCATCAGAG
AATTCATACTGGGGAGAAGCCTTTCAAGTGTGAGGAGTGTGGGAAGGAATTCAGCTTGAATTCCGGGCTT
ATTGCTCACCGGAGAGTCCACACGGGAGAGAAACCCTATGAGTGCAAGGACTGTGGGAAAGGCTTCAGTC
TTGCCTCAAGTCTACGGACTCATCAGAGAGTTCACACTGGTGAGAAGCCCTTCCAATGCAATGAGTGCCA
GAAGCGGTTCAGTCAGGTCTCACACCTCCAGTCCCACCAGAGAGTGCACACTGGGGAGAAGCCCTACAAA
TGTGACCGGTGTGGGAAAGCTTTCAGCCAGAAGTCTGGGCTCCAAGTCCATAAGAGAATTCACACTGGGG
AGAAGCCGTTCAAGTGTGAGGAGTGTGGGAAGGAATTCATCTGGAGCTCAGGGCTTAGTGCTCACCGGAA
GGTTCATACAGGAGAGAAACCCTACAGACGTCGGCAGTATGGGAAGGGCCTCATCAGGCCTCACACTTCC
GATTAA

Translation (701 aa):
MCLPSQEAVTFRDVAVVFSEEELGLLDAAQRKLYHDVMLENFRNLLAVGGQSPNKMEIVDATGLRCLSLG
QLLCWGETSHNINKLARALEAVINTQGKCSHSLEQCHSSCHRVSEEPPRDSEDSSSPDLTNDHSSITENQ
EFLSGRAQGSWGKRRLRKRQNHQKNCLQTLMKNKPQLLAQHSPVHSTQEDTRHSFSVPVQESIYPGRKRY
RCQECGKAFRQSSALQTHQRVHTGEKPYRGNSRGKNFSRSSDLNIHRQVHTREKPYTCKVCKKRFMQCSL
LQAHKRIHTGEKPYKCGDCGKRFSCISNFHIHQRVHTKSKPSKCDYGKPFNLRCNFHSHQRVHTGEKPYK
CEECGKGFTSASSFQRHQRVHTGEKPFVCSVCGKGFSRTSYLQTHQRVHSGDKPYQCDSCGKGFTQLSHL
QAHERIHTDQKPYKCGDCGKRFSCSSNLHTHQRVHTGEKPYKCEECGKGFSLVSGLQAHQRVETGKKPFK
CNACQKRFSQAWNLHAHQRVHTGEKPYKCDTCGKAFGQRSGLQIHQRIHTGEKPFKCEECGKEFSLNSGL
IAHRRVHTGEKPYECKDCGKGFSLASSLRTHQRVHTGEKPFQCNECQKRFSQVSHLQSHQRVHTGEKPYK
CDRCGKAFSQKSGLQVHKRIHTGEKPFKCEECGKEFIWSSGLSAHRKVHTGEKPYRRRQYGKGLIRPHTS
D


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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