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Report for CCDS8064.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8064.1 Public Homo sapiens 11 PLCB3 24 110 108 CCDS HistoryNCBI Gene:5331Re-query CCDS DB by CCDS ID:8064.1Re-query CCDS DB by GeneID:5331See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8064.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000279230.12 ENSP00000279230.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000279230.12Link to Ensembl Protein Viewer:ENSP00000279230.6Re-query CCDS DB by Nucleotide ID:ENST00000279230Re-query CCDS DB by Protein ID:ENSP00000279230
Original member Current member EBI ENST00000540288.5 ENSP00000443631.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000540288.5Link to Ensembl Protein Viewer:ENSP00000443631.1Re-query CCDS DB by Nucleotide ID:ENST00000540288Re-query CCDS DB by Protein ID:ENSP00000443631
Original member Current member NCBI NM_000932.5 NP_000923.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000932.5Link to Protein Sequence:NP_000923.1Re-query CCDS DB by Nucleotide ID:NM_000932Re-query CCDS DB by Protein ID:NP_000923Link to BLAST:NP_000923.1
Original member Current member NCBI NM_001316314.3 NP_001303243.1 Accepted alive Link to Nucleotide Sequence:NM_001316314.3Link to Protein Sequence:NP_001303243.1Re-query CCDS DB by Nucleotide ID:NM_001316314Re-query CCDS DB by Protein ID:NP_001303243Link to BLAST:NP_001303243.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000923.1 1234 Q01970-1 1234 100% 0 0
NP_001303243.1 1234 Q01970-1 1234 100% 0 0

Chromosomal Locations for CCDS 8064.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 64251650 64251748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64254415 64254492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64254748 64254816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64254898 64255038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64255234 64255313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64255396 64255449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64255541 64255616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64255721 64255821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64256376 64256542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64256618 64256764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64258473 64258713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64258885 64258969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64259058 64259244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64260029 64260234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64261400 64261496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64261581 64261665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64261952 64262076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64262407 64262561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64262647 64262808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64263498 64263597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64263691 64263795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64264021 64264112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64264951 64265104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64265192 64265227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64265310 64265502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64265886 64266039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64266126 64266202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64266315 64266404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64266495 64266552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64267185 64267271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64267353 64267556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3705 nt):
ATGGCGGGCGCCCAGCCCGGCGTCCACGCGCTGCAGTTGGAGCCGCCCACCGTGGTGGAGACCCTGCGGC
GCGGGAGTAAGTTCATCAAATGGGACGAGGAGACCTCCAGTCGGAACCTGGTGACCCTGCGTGTGGACCC
CAATGGCTTCTTCTTGTACTGGACGGGCCCCAACATGGAGGTGGACACACTGGACATCAGTTCCATCAGG
GACACACGGACAGGCCGGTACGCCCGCCTGCCCAAGGACCCCAAGATCCGGGAAGTTCTGGGCTTTGGGG
GTCCCGATGCCCGGCTGGAGGAGAAGCTGATGACGGTGGTGTCTGGGCCAGACCCAGTGAACACAGTGTT
CTTGAACTTCATGGCCGTGCAGGATGACACAGCCAAGGTCTGGTCTGAGGAGCTATTCAAGCTGGCTATG
AACATCCTGGCTCAGAACGCCTCCCGGAACACCTTCCTGCGCAAAGCATACACGAAGCTGAAGCTGCAGG
TGAACCAGGATGGTCGGATCCCCGTCAAGAACATCCTGAAGATGTTCTCAGCAGACAAGAAGCGGGTGGA
GACTGCGCTGGAATCCTGTGGCCTCAAATTCAACCGGAGTGAGTCCATCCGGCCTGATGAGTTTTCCTTG
GAAATCTTTGAGCGGTTCCTGAACAAGCTGTGTCTGCGGCCGGACATTGACAAGATCCTGCTGGAGATAG
GCGCCAAGGGCAAGCCATACCTGACGCTGGAGCAGCTCATGGACTTCATCAACCAGAAGCAACGCGACCC
GAGACTCAACGAAGTGCTGTACCCGCCCCTGCGGCCCTCCCAGGCCCGGCTGCTCATCGAAAAGTATGAG
CCCAACCAGCAGTTTCTGGAGCGAGACCAGATGTCCATGGAGGGCTTTAGCCGCTACCTGGGAGGCGAGG
AGAATGGCATCCTGCCCCTGGAAGCCCTGGATCTGAGCACGGACATGACCCAGCCACTGAGTGCCTACTT
CATCAACTCCTCGCATAACACCTATCTCACTGCGGGGCAGCTGGCTGGGACCTCGTCGGTGGAGATGTAC
CGCCAGGCACTACTATGGGGCTGCCGCTGCGTGGAGCTGGACGTGTGGAAGGGACGGCCGCCTGAGGAGG
AACCCTTCATTACCCACGGCTTCACCATGACCACAGAGGTGCCTCTGCGCGACGTGCTGGAGGCCATTGC
CGAGACTGCCTTCAAGACCTCGCCCTACCCCGTCATCCTCTCCTTCGAGAACCATGTGGACTCGGCAAAG
CAACAGGCAAAGATGGCTGAGTACTGCCGCTCCATCTTTGGAGACGCGCTACTCATCGAGCCTCTGGACA
AGTACCCGCTGGCCCCAGGCGTTCCCCTGCCCAGCCCCCAGGACCTGATGGGCCGTATCCTGGTGAAGAA
CAAGAAGCGGCACCGACCCAGCGCAGGTGGCCCAGACAGCGCCGGGCGCAAGCGGCCCCTGGAGCAGAGC
AATTCTGCCCTGAGCGAGAGCTCCGCGGCCACCGAGCCCTCCTCCCCGCAGCTGGGGTCTCCCAGCTCTG
ACAGCTGCCCAGGCCTGAGCAATGGGGAGGAGGTAGGGCTTGAGAAGCCCAGCCTGGAGCCTCAGAAGTC
TCTGGGTGACGAGGGCCTGAACCGAGGCCCCTATGTTCTTGGACCTGCTGACCGTGAGGATGAGGAGGAA
GATGAGGAAGAGGAGGAACAGACAGACCCCAAAAAGCCAACTACAGATGAGGGCACAGCCAGCAGCGAGG
TGAATGCCACTGAGGAGATGTCCACGCTTGTCAACTACATCGAACCTGTCAAGTTCAAGTCCTTTGAGGC
TGCTCGAAAGAGGAACAAATGCTTCGAGATGTCGTCCTTTGTGGAGACCAAGGCCATGGAGCAACTGACC
AAGAGCCCCATGGAGTTTGTGGAATACAACAAGCAGCAGCTCAGCCGCATCTACCCCAAGGGCACCCGCG
TGGACTCCTCCAACTACATGCCCCAGCTCTTCTGGAACGTAGGGTGCCAGCTTGTTGCGCTCAACTTCCA
GACCCTCGATGTGGCGATGCAGCTCAACGCGGGCGTTTTTGAGTACAACGGGCGCAGCGGGTACCTGCTC
AAGCCGGAGTTCATGCGGCGGCCGGACAAGTCCTTCGACCCCTTCACTGAGGTCATCGTGGATGGCATCG
TGGCCAATGCCTTGCGGGTCAAGGTGATCTCAGGGCAGTTCCTGTCCGACAGGAAGGTGGGCATCTACGT
GGAGGTGGACATGTTTGGCCTCCCTGTTGATACGCGGCGCAAGTACCGCACCCGGACCTCTCAGGGGAAC
TCGTTCAACCCCGTGTGGGACGAAGAGCCCTTCGACTTCCCCAAGGTGGTGCTGCCCACGCTGGCTTCAC
TTCGCATTGCAGCCTTTGAGGAGGGGGGTAAATTCGTAGGGCACCGGATCCTGCCTGTCTCTGCCATCCG
CTCCGGATACCACTACGTCTGCCTGCGGAACGAGGCCAACCAACCGCTGTGCCTGCCGGCCCTGCTCATC
TACACCGAAGCCTCGGACTACATTCCTGACGACCACCAGGACTATGCGGAGGCCCTGATCAACCCCATTA
AGCACGTCAGCCTGATGGACCAGAGGGCCCGGCAGCTGGCCGCCCTCATTGGGGAGAGTGAGGCTCAGGC
TGGCCAAGAGACGTGCCAGGACACCCAGTCTCAGCAGCTGGGGTCTCAGCCGTCCTCAAACCCCACCCCC
AGCCCACTGGATGCCTCCCCCCGCCGGCCCCCTGGCCCCACCACCTCCCCTGCCAGCACCTCCCTCAGCA
GCCCAGGGCAGCGTGATGATCTCATCGCCAGCATCCTCTCAGAGGTGGCCCCCACCCCGCTGGATGAGCT
CCGAGGTCACAAGGCTCTGGTCAAGCTCCGGAGCCGGCAAGAGCGAGACCTGCGGGAGCTGCGCAAGAAG
CATCAGCGGAAGGCAGTCACCCTCACCCGCCGCCTGCTGGATGGCCTGGCTCAGGCACAGGCTGAGGGCA
GGTGCCGGCTGCGGCCAGGTGCCCTAGGTGGGGCCGCTGATGTGGAGGACACGAAGGAGGGGGAGGACGA
GGCAAAGCGGTATCAGGAGTTCCAGAACAGACAGGTGCAGAGCCTGCTGGAGCTGCGGGAGGCCCAGGTG
GACGCAGAGGCCCAGCGGAGGCTGGAACACCTGAGACAGGCTCTGCAGCGGCTCAGGGAGGTCGTCCTTG
ATGCAAACACAACTCAGTTCAAGAGGCTGAAAGAGATGAACGAGAGGGAGAAGAAGGAGCTGCAGAAGAT
CCTGGACAGAAAGCGCCATAACAGCATCTCGGAGGCCAAGATGAGGGACAAGCATAAGAAGGAGGCGGAA
CTGACGGAGATTAACCGTCGGCACATCACTGAGTCAGTCAACTCCATCCGTCGGCTGGAGGAGGCCCAGA
AGCAGCGGCATGACCGTCTTGTGGCTGGGCAGCAGCAGGTCCTGCAACAGCTGGCAGAAGAGGAGCCCAA
GCTGCTGGCCCAGCTGGCCCAGGAGTGTCAGGAGCAGCGGGCGAGGCTCCCCCAGGAGATCCGCCGGAGC
CTGCTGGGCGAGATGCCGGAGGGGCTGGGGGACGGGCCTCTGGTGGCCTGTGCCAGCAACGGTCACGCAC
CCGGGAGCAGCGGGCACCTGTCGGGCGCTGACTCGGAGAGCCAGGAGGAGAACACGCAGCTCTGA

Translation (1234 aa):
MAGAQPGVHALQLEPPTVVETLRRGSKFIKWDEETSSRNLVTLRVDPNGFFLYWTGPNMEVDTLDISSIR
DTRTGRYARLPKDPKIREVLGFGGPDARLEEKLMTVVSGPDPVNTVFLNFMAVQDDTAKVWSEELFKLAM
NILAQNASRNTFLRKAYTKLKLQVNQDGRIPVKNILKMFSADKKRVETALESCGLKFNRSESIRPDEFSL
EIFERFLNKLCLRPDIDKILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYE
PNQQFLERDQMSMEGFSRYLGGEENGILPLEALDLSTDMTQPLSAYFINSSHNTYLTAGQLAGTSSVEMY
RQALLWGCRCVELDVWKGRPPEEEPFITHGFTMTTEVPLRDVLEAIAETAFKTSPYPVILSFENHVDSAK
QQAKMAEYCRSIFGDALLIEPLDKYPLAPGVPLPSPQDLMGRILVKNKKRHRPSAGGPDSAGRKRPLEQS
NSALSESSAATEPSSPQLGSPSSDSCPGLSNGEEVGLEKPSLEPQKSLGDEGLNRGPYVLGPADREDEEE
DEEEEEQTDPKKPTTDEGTASSEVNATEEMSTLVNYIEPVKFKSFEAARKRNKCFEMSSFVETKAMEQLT
KSPMEFVEYNKQQLSRIYPKGTRVDSSNYMPQLFWNVGCQLVALNFQTLDVAMQLNAGVFEYNGRSGYLL
KPEFMRRPDKSFDPFTEVIVDGIVANALRVKVISGQFLSDRKVGIYVEVDMFGLPVDTRRKYRTRTSQGN
SFNPVWDEEPFDFPKVVLPTLASLRIAAFEEGGKFVGHRILPVSAIRSGYHYVCLRNEANQPLCLPALLI
YTEASDYIPDDHQDYAEALINPIKHVSLMDQRARQLAALIGESEAQAGQETCQDTQSQQLGSQPSSNPTP
SPLDASPRRPPGPTTSPASTSLSSPGQRDDLIASILSEVAPTPLDELRGHKALVKLRSRQERDLRELRKK
HQRKAVTLTRRLLDGLAQAQAEGRCRLRPGALGGAADVEDTKEGEDEAKRYQEFQNRQVQSLLELREAQV
DAEAQRRLEHLRQALQRLREVVLDANTTQFKRLKEMNEREKKELQKILDRKRHNSISEAKMRDKHKKEAE
LTEINRRHITESVNSIRRLEEAQKQRHDRLVAGQQQVLQQLAEEEPKLLAQLAQECQEQRARLPQEIRRS
LLGEMPEGLGDGPLVACASNGHAPGSSGHLSGADSESQEENTQL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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