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Report for CCDS80351.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
80351.1 Public Mus musculus 5 Zfp951 23 108 98 CCDS HistoryNCBI Gene:626391Re-query CCDS DB by CCDS ID:80351.1Re-query CCDS DB by GeneID:626391See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 80351.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000186219.6 ENSMUSP00000140625.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000186219.6Link to Ensembl Protein Viewer:ENSMUSP00000140625.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000186219Re-query CCDS DB by Protein ID:ENSMUSP00000140625
Original member Current member NCBI NM_001039231.3 NP_001034320.3 Accepted alive Link to Nucleotide Sequence:NM_001039231.3Link to Protein Sequence:NP_001034320.3Re-query CCDS DB by Nucleotide ID:NM_001039231Re-query CCDS DB by Protein ID:NP_001034320Link to BLAST:NP_001034320.3

Chromosomal Locations for CCDS 80351.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 104814343 104815435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 104816699 104816759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 104816997 104817123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 104817308 104817352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 104859667 104859696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1356 nt):
ATGGCCAGCACATGCTCACTGCCCACAAAGGTACTCACAGATACTCTTCTTGCAAATGCATGCCCCATTC
AAAAGAATGCAGTGACATATGAGGATGTGCATGTGAACTTTACTCGGGAAGAATGGGCTTTGCTGGATCC
TTCCCAGAAGAGTCTCTACAAGGATGTGATGCTGGAGACCTACAGGACCCTCAGAGCTATAGGCTGTTAT
TGGGAAGACCACAGTAATGAAGAAAATTCTCAAACTTCTAGAAGACATGGAAGGCATCTTCAAATGGAAG
ACAGAACTCATACTGGAGATAAAAGCTATGAAGGTGTGCAATGTAACAAAGTGCTTTCGAGTCACAATCA
TGCTCAGATATATAAAGGAATGCTTACTGGAGCCTTTGTACTTTATACTGGTGGTCAAATGCATAGCAGA
ACACAGGCAGGGGATAAGCCCTGTGACTGTAACACACTTGGTAAATCCTGTACATGCAACAGCCATCTGC
AAAGCCATAAAAGAACAGATACTAGAGAGAATCCTTATAAATGTAATCACTGTGGTAAAGCCTTTGCTCG
TCACAGGGATCTTCAAAACCATGAAAGGACACATACTGGAGAGAAGCCCTATGAATGTAAGCAATGTGGT
AAAGCCTTTGCTCTTAACAGCTATCTCCATATCCATGAAAGGACACATACTGGAGAAAAGCCCTTTGAGT
GTAGCCAATGTGGTAAAGCCTTTGCTTGTCATAGCCATCTTCAAAGCCATAAAAGAACACATACTGGAGA
GAAGCCCTATGAATGTAACCAATGTGGCAAAGCCTTTTCATGGAACTATTGTCTTCAAATTCATAAAAGA
ACACATACTGGAGAGAAGCCCTATGCATGTAACCAATGTGGCAAAGCCTTTGCTTGTCATAGCCATCTTC
AAAGTCATGAAAGAACTCATACTGGAGAGAAGCCCTATGAATGTGACCAATGTGGTAAAGCCTTTTCATG
GAACTATTGTCTTCAAATTCATAAAAGAACACATACTGGAGAGAAGCCCTATGAATGTAACCAATGTGGC
AAAGCCTTTGCTTGTCATAGCCATCTTCAAAGGCATGAAAAGACACATACTGGAGAGAAGCCCTATGAAT
GTGACCAATGTGGTAAAGCCTTTTCATGGAACTATTGTCTTCAAATTCATAAAAGAACACATACTGGAGA
GAAGCCCTATGCATGTAACCAATGTGGCAAAGCCTTTCCTCGTCACCACCATCTTCAAAACCATGAAAGG
ACACATACTGGAGAGAAGCCCTATGAATGTAACCAATGTGGTAAAACCTTTGCATGTCACAGTGCTTTTC
AAAGGCATAAAAGAACACATACTTGA

Translation (451 aa):
MASTCSLPTKVLTDTLLANACPIQKNAVTYEDVHVNFTREEWALLDPSQKSLYKDVMLETYRTLRAIGCY
WEDHSNEENSQTSRRHGRHLQMEDRTHTGDKSYEGVQCNKVLSSHNHAQIYKGMLTGAFVLYTGGQMHSR
TQAGDKPCDCNTLGKSCTCNSHLQSHKRTDTRENPYKCNHCGKAFARHRDLQNHERTHTGEKPYECKQCG
KAFALNSYLHIHERTHTGEKPFECSQCGKAFACHSHLQSHKRTHTGEKPYECNQCGKAFSWNYCLQIHKR
THTGEKPYACNQCGKAFACHSHLQSHERTHTGEKPYECDQCGKAFSWNYCLQIHKRTHTGEKPYECNQCG
KAFACHSHLQRHEKTHTGEKPYECDQCGKAFSWNYCLQIHKRTHTGEKPYACNQCGKAFPRHHHLQNHER
THTGEKPYECNQCGKTFACHSAFQRHKRTHT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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