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Report for CCDS79792.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
79792.1 Public Mus musculus 2 Kynu 23 108 98 CCDS HistoryNCBI Gene:70789Re-query CCDS DB by CCDS ID:79792.1Re-query CCDS DB by GeneID:70789See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 79792.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000112826.7 ENSMUSP00000108445.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112826.7Link to Ensembl Protein Viewer:ENSMUSP00000108445.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000112826Re-query CCDS DB by Protein ID:ENSMUSP00000108445
Original member Current member NCBI NM_001289593.1 NP_001276522.1 Accepted alive Link to Nucleotide Sequence:NM_001289593.1Link to Protein Sequence:NP_001276522.1Re-query CCDS DB by Nucleotide ID:NM_001289593Re-query CCDS DB by Protein ID:NP_001276522Link to BLAST:NP_001276522.1

Chromosomal Locations for CCDS 79792.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 43562967 43563138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43581346 43581466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43589389 43589471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43599581 43599642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43600725 43600796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43602243 43602317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43604142 43604288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43628953 43629051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43631546 43631619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43671359 43671411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43672671 43672756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43679752 43679994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1287 nt):
ATGATGGAGCCTTCGCCTCTTGAGCTTCCAGTTGATGCAGTGCGGCGCATCGCGGCTGAACTCAATTGTG
ACCCAACAGATGAGAGGGTTGCTCTCCGCTTGGATGAGGAAGATAAACTGAGTCATTTTAGGAACTGTTT
TTATATTCCCAAAATGCGGGACCTGCCTTCAATTGATCTATCTTTAGTGAGTGAGGATGATGATGCCATC
TATTTCCTGGGAAATTCCCTTGGCCTTCAACCGAAAATGGTTAGGACATACCTGGAGGAAGAACTAGATA
AGTGGGCCAAGATGGGAGCCTATGGCCATGATGTAGGCAAACGCCCTTGGATTGTAGGGGATGAGAGTAT
TGTAAGCCTTATGAAGGACATTGTAGGAGCCCATGAGAAAGAAATAGCTCTAATGAATGCTTTGACTATT
AATTTACATCTCCTGCTGTTATCATTCTTTAAGCCTACTCCAAAGCGGCACAAAATTCTTCTAGAAGCCA
AAGCCTTCCCTTCTGATCATTATGCTATTGAGTCACAGATTCAACTTCACGGACTTGATGTTGAGAAAAG
TATGCGGATGGTAAAGCCACGAGAGGGGGAAGAGACCTTAAGGATGGAGGACATACTGGAAGTAATCGAG
GAGGAAGGAGACTCGATCGCCGTGATCCTGTTCAGTGGGCTGCACTTTTATACTGGACAGCTGTTCAACA
TTCCTGCCATAACAAAAGCTGGACATGCAAAGGGCTGTTTTGTTGGCTTTGACCTAGCACATGCAGTTGG
AAATGTTGAACTCCGCTTACATGACTGGGGTGTTGACTTTGCCTGCTGGTGTTCCTATAAGTATTTAAAT
TCAGGAGCTGGAGGTCTGGCTGGTGCCTTTGTCCACGAGAAACATGCTCATACTGTCAAGCCTGCGTTAG
TGGGATGGTTCGGCCATGACCTCAGTACAAGGTTTAACATGGATAACAAACTACAATTAATCCCCGGGGC
CAATGGATTCCGAATTTCAAACCCTCCCATTTTGTTGGTCTGCTCCTTGCACGCCAGTTTAGAGGTCTTT
CAGCAAGCAACTATGACTGCGCTGAGAAGAAAATCCATTCTGCTGACAGGTTATCTGGAATACATGCTCA
AACATTACCACAGCAAAGATAACACCGAAAACAAGGGGCCGATTGTGAATATCATCACCCCGTCCAGAGC
AGAGGAGCGTGGCTGCCAGTTAACACTCACCTTTTCCATTCCCAAGAAAAGCGTTTTTAAGGAACTAGAA
AAAAGAGGAGTCGTTGTATGTATATAA

Translation (428 aa):
MMEPSPLELPVDAVRRIAAELNCDPTDERVALRLDEEDKLSHFRNCFYIPKMRDLPSIDLSLVSEDDDAI
YFLGNSLGLQPKMVRTYLEEELDKWAKMGAYGHDVGKRPWIVGDESIVSLMKDIVGAHEKEIALMNALTI
NLHLLLLSFFKPTPKRHKILLEAKAFPSDHYAIESQIQLHGLDVEKSMRMVKPREGEETLRMEDILEVIE
EEGDSIAVILFSGLHFYTGQLFNIPAITKAGHAKGCFVGFDLAHAVGNVELRLHDWGVDFACWCSYKYLN
SGAGGLAGAFVHEKHAHTVKPALVGWFGHDLSTRFNMDNKLQLIPGANGFRISNPPILLVCSLHASLEVF
QQATMTALRRKSILLTGYLEYMLKHYHSKDNTENKGPIVNIITPSRAEERGCQLTLTFSIPKKSVFKELE
KRGVVVCI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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